Vibrio sabulosilitoris: MAO6_02790
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Entry
MAO6_02790 CDS
T11925
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vsb Vibrio sabulosilitoris
Pathway
vsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MAO6_02790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vsb03021
]
MAO6_02790 (rho)
03019 Messenger RNA biogenesis [BR:
vsb03019
]
MAO6_02790 (rho)
Transcription machinery [BR:
vsb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MAO6_02790 (rho)
Messenger RNA biogenesis [BR:
vsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MAO6_02790 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
FtsK_SpoIIIE
TP_0747_N
Motif
Other DBs
NCBI-ProteinID:
BFG46768
LinkDB
All DBs
Position
1:complement(317892..319151)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNRPVSELVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKDGERYFALLKVNTVN
HDKPDNARNKILFENLTPLHANERMVMERGNGATEDITARILDLASPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPECELMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTKNDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacagaactgaagaacagacctgtgtctgagcttgttaagctgggcgaaagc
ttaggtttggaaaaccttgctcgtctaagaaaacaagacattatcttcgccatccttaaa
gcacacgcgaaaagcggcgaggacatttttggtgacggtgttctagagattcttcaagac
ggttttggtttcctgcgtagtgcagacagttcttaccttgcaggtccagacgatatctat
gtttctccaagtcagattcgtcgtttcaacctgagaacaggcgattcgattgccggtaag
atccgtccaccgaaagacggtgagcgttacttcgcgttgcttaaggtgaacacggttaac
catgacaagcctgacaatgcgcgaaataagatcctatttgaaaacctgaccccactgcac
gccaatgagcgtatggtgatggagcgcggtaatggtgcgacagaagatatcactgctcgt
atcctcgaccttgcatctcctatcggtaaaggtcagcgtggtttgattgttgctccgcca
aaagcgggtaaaaccatgttgctacagaatattgctcaaagcattgcttacaaccaccca
gagtgtgagttgatggtattgcttatcgacgagcgtccagaagaagtgaccgagatgcag
cgcctagtaaaaggtgaagtggttgcatcaacgttcgacgagccagcatcacgtcacgtt
caagtggctgaaatggtgattgaaaaggccaagcgtctggtagagcacaagaaagatgtg
gttatcctgcttgactcaatcacgcgtctagcgcgtgcttacaacaccgttgtcccttca
tcaggtaaagtactgaccggtggtgtagatgccaacgcactacatcgtcctaagcgcttc
tttggtgcggcacgtaacgttgaagagggtggtagcttgaccatcatcgcaacagcgctt
gtggataccggctctaagatggatgaagttatctacgaagagttcaagggtaccggtaac
atggaactgcacctgaaccgtaagatcgctgagaagcgtgtcttccctgcgattgacttc
aaccgctcaggtactcgccgtgaggagcttctgaccaagaacgacgagctacagaagatg
tggatcttgcgtaagattgttcacccaatgggcgagaccgacgcaatggagttcttgatc
gataagttggcgatgaccaaaaccaacgatgagttctttgacgcaatgcgtcgtcaataa
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