Vibrio sabulosilitoris: MAO6_02880
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Entry
MAO6_02880 CDS
T11925
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vsb Vibrio sabulosilitoris
Pathway
vsb03420
Nucleotide excision repair
vsb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MAO6_02880 (uvrD)
03430 Mismatch repair
MAO6_02880 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsb03400
]
MAO6_02880 (uvrD)
Enzymes [BR:
vsb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MAO6_02880 (uvrD)
DNA repair and recombination proteins [BR:
vsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MAO6_02880 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MAO6_02880 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BFG46777
LinkDB
All DBs
Position
1:complement(328099..330270)
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AA seq
723 aa
AA seq
DB search
MDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQSSPFSIMSV
TFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQQ
RLIKRLIKAQNLDEKQWPARQVSWWINGKKDEGLRPSHIDAYHDPITQTYLQLYSAYQEA
CDRAGLVDFAEILLRAHELLRDKKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGKD
SYVMIVGDDDQSIYGWRGAKIENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNTLIANN
TERMGKELWTDGSEGEPISVYSAYNELDEARFAVNKIKEWQDKGGSLNDAAMLYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMANRNDDAAFERVVNTPTRGLGD
KTLETIRLAARERGCTMWDASKALLDEKVLAGRASGALSRFIELIDALEDDTDELALHSQ
TDHVIKFSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEAEEMTLLTAFLTHAAL
EAGEGQADEFEDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPEKCLDEVRMKAKVSRPASSGRFS
QTAVKENFNETGFTLGARVNHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYARL
EKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatccctccctattgctcgatggccttaatgacaagcagcgtgaagccgttgccgct
ccccttgaaaatttacttgtcctcgctggcgcgggcagtggtaaaacccgagtgcttgtt
caccgcattgcatggctgatgtcagtagagcaatcatctccgttctccatcatgtcagtg
acctttaccaacaaagcggccgctgagatgcgcggtcgtattgaagagttgatgatgggc
agtgcctcggggatgtggaatggtaccttccatggtatctgtcaccgcatcttgcgcgct
cactatctcgatgccaagctgccagaggattttcagatcatcgatagcgatgatcagcag
cgtctaatcaagcgtttgattaaagcgcagaatttggatgaaaagcagtggccagctcgt
caggtttcgtggtggattaatggcaaaaaagacgagggtctgcgcccaagccatattgat
gcctaccatgacccgatcacccagacttacttgcagctttactcagcttaccaagaggcg
tgtgatcgcgcggggctggtggactttgccgaaattttgctgcgcgcccacgaattgctg
cgagataaaaagcacatccgagagcactatcaagcgcgctttaaacacattctggtggac
gagtttcaagataccaacaacatccaatatgcctggctgcgcatgatggcgggtaaggac
agttatgtgatgattgttggtgatgacgatcagtcgatctatggctggcgtggtgccaag
attgagaatatcgagaagtttactctcgagtttccgagcgtgaacacgattcgccttgag
cagaactaccgctcaaccaagaccattcttgaggcatccaacaccctgatcgcgaataac
actgagcggatgggtaaagagttgtggaccgatggcagcgagggtgagccgatctcggtt
tactccgcttacaacgagcttgatgaggcgcgctttgcggtcaataagatcaaagagtgg
caagacaagggcggcagcctgaacgatgccgcgatgctgtatcgaaacaatgcccagtcg
cgtgtgctggaagaagccttgattcaagctggcttgccttaccgtatttatggcggcatg
cgcttcttcgagcgtcaagagatcaaagatgcgctgagttacctacgtttgatggccaac
cgtaatgatgatgccgcgtttgagcgtgtggtgaatactccgactcgtggcttgggcgac
aaaaccctcgagacgatccgcttggcggctcgtgagcgtggctgcaccatgtgggatgcg
agtaaggcgctgttggatgagaaggtattggccggtcgcgcctcaggggcactgagtcgt
tttattgagttgattgatgcgcttgaggacgatactgatgagttagcactgcactcgcaa
accgaccacgtgattaagttctcgggtctatttgccatgtatgagcaagagaagggcgag
aagtctaaggcacgcattgagaacttggaagagctggtgactgcgacgcgtcagtttgaa
aaaccggaagaagctgaagagatgacgctactgaccgccttcttgacccatgccgcgctt
gaagccggtgaaggtcaagcggacgagtttgaggatgcggtacaactgatgacgctgcac
agtgccaagggtcttgagttcccgttggtgtttatggtcggcgttgaagagggcatgttc
cctagtcagatgtcagctgaagaagcgggccgcctcgaagaggagcgtcgcctgtgttat
gtgggtatgacgcgagcgatggaaaagctctacatcacctatgctgagatgcgtcgcctg
tatggtcaagacaagtaccacaagccgtcgcgctttattcgtgagctgccagagaagtgt
ttagatgaagtgcgaatgaaggccaaagtcagtcgcccggccagcagcggacgctttagc
cagacggcggtaaaagagaactttaatgagaccggttttacgcttggcgcacgagtgaac
catcccaagtttggtgagggcacgattattaactttgagggtagtggtccacaaagtcgt
gtccaggtcgcgtttaacggtgagggtattaagtggttggtaacggcttatgcccgccta
gaaaagctgtag
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integrated database retrieval system
