Vibrio scophthalmi: VSVS12_00029
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Entry
VSVS12_00029 CDS
T04650
Name
(GenBank) uncharacterized protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VSVS12_00029
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VSVS12_00029
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Gene cluster
GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
ANS83881
LinkDB
All DBs
Position
1:complement(24950..26176)
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AA seq
408 aa
AA seq
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MKHTYVARQPILNARRQTLGYELLFRDGEKNAYPAHVESNRATYRLIAENFLSIGTNPVI
AHSRCFVNFPYQSLIRRLPLSLPKDKIVIEVLETCQPTDELYAAVRELRQQGYLLALDDF
VYSREWERFLPLVHIVKIDISAMGLDNACQFARQRLAQGSKRKYLAERVETEQEFTAVRE
AGFHFFQGYFFSKPEMVRQRYVSPEQLIAMELFREVCQTEVNFDRVERIVAKDVTLSYKL
LHFVNSLSERLEVSISSFRQALIYLGQDRLKMFVSLAVASFVSTKKPRELFNLSLQRAQF
CSLMSNTNPFQQQQDQAFLIGLFSILDAMFDLSIEHLVDQLPLNQAIRLALLERKGPYGI
LLTIEECYEKADWQGMQEACELLNLSMDDVMIKIAEAQKWSQTIQQLS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatacttatgtggcaaggcaaccaatactgaacgcacggcggcaaaccctaggg
tatgagctgctgtttcgtgatggtgaaaaaaatgcctaccctgctcatgtggaatcaaac
cgtgcgacttatcgtctaattgctgaaaattttttgagcattggcactaaccctgtcatt
gctcattcccgctgttttgtcaatttcccttatcagagccttattcgccgcctacctctc
tcgttaccaaaagacaaaatagtcattgaagtactcgaaacttgccaacctaccgatgaa
ttgtatgctgctgttcgcgagttgcggcaacaaggctatctgcttgcattggacgatttc
gtttatagtcgtgagtgggagcgttttcttcccttagtccatattgtcaaaatagacatt
tctgccatgggattagacaacgcctgccaatttgctcgtcaacgacttgcccaaggtagc
aagcgtaaatacttagcggagcgtgtcgaaaccgagcaagaatttaccgcagtgcgtgaa
gcgggttttcacttctttcaagggtacttctttagcaagccagaaatggtacgacaacgc
tatgtgagtccagagcaattgatagcgatggagttgtttcgcgaggtgtgccagaccgag
gtgaattttgaccgtgtcgaacgtatcgtagcgaaagatgtcacgctgtcttacaagctg
ctgcactttgtaaactcgctatcggaaagattagaggtttcgatttcctcatttcgtcag
gctttaatttatttgggccaagaccgattgaaaatgtttgtctcgctggcggtggcttct
tttgtttctaccaaaaagccccgagagttgtttaacctttctctgcagcgggcgcagttc
tgctctttgatgtcgaacactaacccgtttcaacaacagcaagaccaagcgtttctcatt
ggcttgttttccatcttagacgcgatgtttgatctttctattgagcatttagtcgatcaa
cttcctttgaaccaagcgattaggcttgctttacttgagcgtaaaggcccttacggcatt
ttgttaactatcgaagagtgttatgaaaaagccgattggcaagggatgcaagaagcgtgt
gagctgctcaatttatccatggatgatgtgatgataaaaatcgcagaggctcaaaagtgg
agccaaaccattcaacaacttagttaa
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