KEGG   Vibrio scophthalmi: VSVS12_00039
Entry
VSVS12_00039      CDS       T04650                                 
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
vsc  Vibrio scophthalmi
Pathway
vsc00300  Lysine biosynthesis
vsc00470  D-Amino acid metabolism
vsc01100  Metabolic pathways
vsc01110  Biosynthesis of secondary metabolites
vsc01120  Microbial metabolism in diverse environments
vsc01230  Biosynthesis of amino acids
Module
vsc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    VSVS12_00039 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VSVS12_00039 (lysA)
Enzymes [BR:vsc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     VSVS12_00039 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ANS83891
UniProt: A0A1B1NJS1
LinkDB
Position
1:complement(34470..35723)
AA seq 417 aa
MDYFNYQDDGQLWAEEVPLSDLAEQFGTPLYVYSRATLERHWHAFDKAVGEHPHLVCFAV
KANSNIGVLNTLARLGSGFDIVSGGELERVIAAGGEPSKVVFSGLGKTEAEMKRALELGI
KCFNVESEPELERLNKVAAELGVKAPVSLRINPDVDAQTHPYISTGLRENKFGIAFDRAP
VVYELAVQLPHLDVKGIDCHIGSQLTDLEPFIDATDRLLALIDELKSKGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLDNHQDLELIFEPGRAICANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVTPRDGAAKDYDVVGAICETSDFLGKDRSLALEP
NDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNRAHLVRQREELTSLWALESVLPE
NT seq 1254 nt   +upstreamnt  +downstreamnt
ttggattacttcaattatcaggatgatggccaactttgggccgaagaggttcctttatct
gatttagcagagcaatttggaacaccactttatgtctattcacgtgcaacgctggaacgc
cattggcatgcgtttgataaagccgttggtgaacacccgcatttagtttgtttcgcagtg
aaagccaactcaaacattggcgtattgaatacgctggctcgtttaggttctggctttgat
attgtctcaggcggtgagcttgagcgtgttatcgcggcaggtggtgagccaagtaaagtt
gtgttttctggcttaggtaaaacagaagcggaaatgaaacgtgcgttagaactcggcatt
aaatgttttaatgttgaatctgaacctgaactggagcgcttaaataaagtcgcggcagaa
ttaggggtgaaagcgccggtctcattacgcatcaatccagatgtcgatgctcagacccat
ccatacatttctactggtttacgtgaaaacaaatttggtatcgcttttgatcgtgctcca
gtggtgtatgaacttgccgttcaattacctcaccttgatgtcaaaggcatagattgccat
atcggttcacagttgacggatcttgaacctttcattgatgctaccgatcgtctattggct
ctgattgatgagttgaagtcgaaaggcatcaatattcgccatcttgatgtgggtggtggt
cttggtgttgtttatcgtgatgagttgcctcctcagccatctgactatgccaaagcctta
cttggtcgcctagataatcatcaagatcttgaattgatcttcgaaccgggtcgtgccatc
tgcgccaacgccggtgtcttactgactaaggttgaattcctaaagcacactgaacacaaa
aactttgccattattgacgcggcgatgaacgacttgatgcgccctgcgctataccaagcg
tggcaagatatcgtgccagtgacaccgcgagatggtgcagcaaaagattacgatgtggtc
ggggctatttgtgaaaccagtgatttcttgggcaaagaccgttcattggcgttagagcca
aatgatttactggcggtacgttctgctggtgcttatggctttgtgatgtcgtctaactac
aatacgcgtactcgtgcggcagaggtgatggttgatggcaatcgagcccacctagtccgt
caacgcgaagaactcactagcctatgggcgctagagagcgttttaccggagtaa

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