Vibrio scophthalmi: VSVS12_00039
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Entry
VSVS12_00039 CDS
T04650
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00300
Lysine biosynthesis
vsc00470
D-Amino acid metabolism
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
vsc01120
Microbial metabolism in diverse environments
vsc01230
Biosynthesis of amino acids
Module
vsc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VSVS12_00039 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSVS12_00039 (lysA)
Enzymes [BR:
vsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VSVS12_00039 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ANS83891
UniProt:
A0A1B1NJS1
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Position
1:complement(34470..35723)
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEEVPLSDLAEQFGTPLYVYSRATLERHWHAFDKAVGEHPHLVCFAV
KANSNIGVLNTLARLGSGFDIVSGGELERVIAAGGEPSKVVFSGLGKTEAEMKRALELGI
KCFNVESEPELERLNKVAAELGVKAPVSLRINPDVDAQTHPYISTGLRENKFGIAFDRAP
VVYELAVQLPHLDVKGIDCHIGSQLTDLEPFIDATDRLLALIDELKSKGINIRHLDVGGG
LGVVYRDELPPQPSDYAKALLGRLDNHQDLELIFEPGRAICANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVTPRDGAAKDYDVVGAICETSDFLGKDRSLALEP
NDLLAVRSAGAYGFVMSSNYNTRTRAAEVMVDGNRAHLVRQREELTSLWALESVLPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaattatcaggatgatggccaactttgggccgaagaggttcctttatct
gatttagcagagcaatttggaacaccactttatgtctattcacgtgcaacgctggaacgc
cattggcatgcgtttgataaagccgttggtgaacacccgcatttagtttgtttcgcagtg
aaagccaactcaaacattggcgtattgaatacgctggctcgtttaggttctggctttgat
attgtctcaggcggtgagcttgagcgtgttatcgcggcaggtggtgagccaagtaaagtt
gtgttttctggcttaggtaaaacagaagcggaaatgaaacgtgcgttagaactcggcatt
aaatgttttaatgttgaatctgaacctgaactggagcgcttaaataaagtcgcggcagaa
ttaggggtgaaagcgccggtctcattacgcatcaatccagatgtcgatgctcagacccat
ccatacatttctactggtttacgtgaaaacaaatttggtatcgcttttgatcgtgctcca
gtggtgtatgaacttgccgttcaattacctcaccttgatgtcaaaggcatagattgccat
atcggttcacagttgacggatcttgaacctttcattgatgctaccgatcgtctattggct
ctgattgatgagttgaagtcgaaaggcatcaatattcgccatcttgatgtgggtggtggt
cttggtgttgtttatcgtgatgagttgcctcctcagccatctgactatgccaaagcctta
cttggtcgcctagataatcatcaagatcttgaattgatcttcgaaccgggtcgtgccatc
tgcgccaacgccggtgtcttactgactaaggttgaattcctaaagcacactgaacacaaa
aactttgccattattgacgcggcgatgaacgacttgatgcgccctgcgctataccaagcg
tggcaagatatcgtgccagtgacaccgcgagatggtgcagcaaaagattacgatgtggtc
ggggctatttgtgaaaccagtgatttcttgggcaaagaccgttcattggcgttagagcca
aatgatttactggcggtacgttctgctggtgcttatggctttgtgatgtcgtctaactac
aatacgcgtactcgtgcggcagaggtgatggttgatggcaatcgagcccacctagtccgt
caacgcgaagaactcactagcctatgggcgctagagagcgttttaccggagtaa
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integrated database retrieval system