Vibrio scophthalmi: VSVS12_00100
Help
Entry
VSVS12_00100 CDS
T04650
Name
(GenBank) Putative peptide-binding periplasmic protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
vsc
Vibrio scophthalmi
Pathway
vsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSVS12_00100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_00100
Transporters [BR:
vsc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
VSVS12_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
NTP_transf_5
Motif
Other DBs
NCBI-ProteinID:
ANS83941
UniProt:
A0A1B1NJW9
LinkDB
All DBs
Position
1:complement(106292..107845)
Genome browser
AA seq
517 aa
AA seq
DB search
MKTMKSKLAVALMAAGLSFNAMAADIKVGYAADPVSLDPHEQLSGGTLQMSHMVFDPLVR
FTQEMDFEPRLAQSWERIDDKTMRFKLREGVKFHSGNALTADDVVWTFDRLQSSPDFKAI
FDPYEKIVKVDDYTFDLVTKGPYPLVLQTATYIFPMDSKFYSGNTADGKDKSEVVKHGNS
FASTNVSGTGPFIVTEREQGVKVEFERFNDYWDTASKGNVDKLTLVPIKEDATRVAALLS
GGVDMIHPVAPNDHKRVKSAEGIDLVTLPGTRIITFQMNQNSNEALKDVRVRQAIVHAIN
NEGIVKKIMKGFATAAGQQSPAGYVGHDEALVPRYDLKKAKQLMKEAGYEDGFALSMIAP
NNRYVNDAKVAQAAAAMLSKIGIKVDLKTMPKAQYWPEFDLCAADMLMIGWHSDTEDSAN
LSEFLTMTRNAETGKGQYNCGYYSNPEMDAVVEAANVETDPAKRAAMLKGVEATLYNDAA
FVPLHWQSEAWGAKSNVKAADIVNPMVMPYFGDLVVE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatgaaaagcaaattagcagtggcgctaatggctgcaggtctaagctttaat
gcaatggcggcagatatcaaagttggctacgcagctgaccctgtttcgttagacccgcat
gagcagttatctggcggtacgctgcaaatgtcacacatggtatttgatccacttgttcgc
tttactcaagagatggattttgaaccgcgccttgcacaaagctgggagcgtattgatgat
aaaaccatgcgcttcaaactgcgtgaaggggtgaagttccactcaggcaatgctttgact
gctgatgatgtggtttggacgtttgaccgtctacaaagctcgccagattttaaagctatc
ttcgacccatatgaaaagattgtgaaagtggatgattacacttttgaccttgtcaccaaa
ggcccatacccactggttctacaaaccgcgacttacatcttcccaatggacagtaagttt
tactcaggtaacaccgccgatggcaaagataaatctgaggtagtgaagcacggtaactca
tttgcctcaaccaatgtttcaggtactggtccgttcatcgtgactgaacgtgaacaaggc
gtaaaagtagaatttgaacgctttaatgattactgggataccgcttctaaaggtaacgtt
gataagctgaccttggtgccaattaaagaagatgcaacgcgtgtcgcagcactactgtct
ggtggtgtggatatgattcacccagtagcgccaaatgatcacaaacgcgttaaatcagcg
gaaggcatcgatctggtcacactaccaggtactcgtatcatcactttccaaatgaaccaa
aacagcaatgaagcgttgaaagacgttcgcgtacgtcaagcaatcgtgcatgcgatcaac
aatgaaggcatcgtgaagaaaatcatgaaaggcttcgcgactgctgcaggtcaacaaagt
ccggcaggttacgtaggccatgatgaagcactagtgccacgttacgatctgaaaaaagcg
aagcagttgatgaaagaagcgggttatgaggatggttttgcgctgagcatgatcgcgcca
aataaccgttatgtgaacgatgcgaaagttgcacaagcggcggctgcgatgctatcgaag
attggcatcaaggtggatctgaaaaccatgcctaaagcgcagtactggcctgagtttgat
ctctgtgcagccgatatgctgatgattggctggcactcagataccgaagattcggctaac
ttgagtgaattcctaaccatgacgcgcaatgcggaaacaggtaaaggccaatacaactgt
ggttactactcaaacccagaaatggatgcggtcgtagaagcggctaacgtagaaaccgat
ccggctaagcgtgcagcgatgctgaaaggcgtagaagcgacgctatacaacgatgcagcg
tttgttccactgcattggcaaagtgaagcgtggggcgcgaaatctaacgtgaaagcggca
gacatcgtcaacccaatggttatgccttactttggcgacttagtggttgaataa
DBGET
integrated database retrieval system
