KEGG   Vibrio scophthalmi: VSVS12_00289
Entry
VSVS12_00289      CDS       T04650                                 
Name
(GenBank) Type II secretion system protein
  KO
K02453  general secretion pathway protein D
Organism
vsc  Vibrio scophthalmi
Pathway
vsc03070  Bacterial secretion system
vsc05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    VSVS12_00289
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VSVS12_00289
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vsc02044]
    VSVS12_00289
Secretion system [BR:vsc02044]
 Type II secretion system
  General secretion pathway protein
   VSVS12_00289
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 CinA
Other DBs
NCBI-ProteinID: ANS84106
LinkDB
Position
1:308852..310876
AA seq 674 aa
MKHWLKKSAWLLAATLVVSPVAMASEYSASFKGTDIQEFINIVGRNLEKTIIVDPSVRGK
IDVRSYDTLSEEQYYSFFLNVLEVYGYAVIEMDNGILKVIKSKDAKTSAIPVVGDGDVKG
DEVVTRVVTVRNVSVRELSPLLRQLNDNAGAGNVVHYDPANIILITGRAAVVNRLADIIK
RVDQAGDKEIEVVDLKNASAAEMVRIVDALNKSSDSKNTPGFLQPKLVADDRTNSVLISG
DPQVRKRLRKLIQQLDVEMASRGNNQVVYLKYAKAEDLVDVLKGVSDNLQAEKSSGGKGS
KSNSDQVMIAAHVSTNALVITAPPSIMTALQNVIAQLDIRRAQVLIEALIVEMAEGDGIN
LGVQWGSLESGATIQYGNTGVPIGQVMVGLEEAKDTTTSESYWNSTNNQWETRETTEKGD
YSTLASALAGVNGAAVSIMMGDWTALLTAVSTDSNSNILSSPSITVMDNGEASFIVGEEV
PVLTGSTAGSNNDNPFQTVDRKEVGIKLKVVPQINEGNSVQLNIEQEVSNVLGANGAVDV
RFAKRQLNTSVIVEDGQMIVLGGLIDERAMESESKVPLLGDIPVLGHLFKSTSTQVEKKN
LMVFIKPTIIRDGVTADGITQRKYNFIRAEQLFKSEQGLKLMDDSHIPVLPEFGHERQHP
AEIQAFIDQMESVQ
NT seq 2025 nt   +upstreamnt  +downstreamnt
gtgaagcattggcttaagaaaagcgcatggctattagccgcaaccttagtggtttctcca
gtagcgatggccagcgaatacagcgccagctttaagggcaccgacattcaagagtttatt
aatattgttggtcgaaacttagaaaaaaccatcattgttgatccgtctgtgcgtggaaaa
attgatgtccgtagctatgacaccttgagcgaagagcagtactacagcttcttcctcaat
gtattagaagtgtatggctacgctgtgatcgagatggataacggcatccttaaagtgatt
aagtcgaaagatgctaaaacatcggcgatcccagtcgtgggtgatggcgacgtgaaaggc
gacgaagtggtcactcgcgtggtcacggtacgtaatgtctcggtgcgtgagctttctccg
ctgctacgccaactgaatgataatgccggtgcgggtaacgttgttcactatgatccggcc
aatattatcttgatcactggccgtgccgcggtagtgaaccgtttagccgatatcatcaag
cgcgttgaccaagcgggtgacaaagaaattgaagtggtggatctgaaaaatgcttctgcc
gctgaaatggtgcgcattgttgatgcattgaataagagcagtgacagcaaaaacacccca
ggatttttacagcctaagctggtggccgatgatcgcactaactcagtactgatttctggt
gacccacaggtgcgtaagcgtctgcgtaaattaatccaacaacttgacgttgaaatggcc
agccgtggtaacaaccaagtggtttaccttaaatacgctaaagcggaagacttggtcgat
gtgctgaaaggcgtctcggacaatctgcaagcggaaaagtcgtctggcggcaaagggtct
aaatccaattctgaccaagtgatgatcgccgcgcacgtatccaccaacgcattggtgatc
actgcgccaccatccatcatgaccgcgctgcaaaacgtcattgctcagcttgatattcgt
cgtgcgcaagtattgattgaagccttgattgttgaaatggccgaaggtgacggcattaat
cttggcgtgcagtggggctcgttagaaagtggtgcgaccattcaatatggcaacacgggt
gtgccgattggccaagtgatggtcggtttggaagaagccaaagatacaacgacgtcagag
agttactggaattcaactaataatcagtgggaaactagagaaacgacagaaaaaggtgat
tacagcacgttagcttccgctcttgcgggcgttaatggtgcggcggtgagcatcatgatg
ggtgactggaccgcgctactaaccgcagtatcgactgactcgaactctaatattctttca
tcaccaagtattactgtgatggataacggcgaagcctcattcatcgtcggtgaagaagta
ccggtattaaccggttctaccgcaggttctaataacgataacccattccaaaccgttgat
cgtaaagaagtcggtatcaaactgaaagtggtgccacaaatcaacgaaggtaattcagtg
caactgaatatcgagcaagaagtctccaacgtacttggtgctaatggggcggtggacgtg
cgttttgctaagcgtcagttgaacacctcagtgattgttgaagacggtcagatgattgtc
ttgggcggtttgattgatgagcgtgcgatggaaagcgaatcgaaagtgccgctattgggt
gatatccctgtgcttggtcacttgttcaaatcaaccagtactcaggttgagaaaaagaac
ctgatggtgtttatcaaaccaaccatcattcgcgatggtgtgaccgccgatggcattact
cagcgtaagtacaatttcattcgtgctgagcagttgttcaaatccgaacagggtttgaag
ttgatggatgacagccacattccggtattgcctgaatttggtcacgaacgtcagcacccg
gctgagattcaagcctttattgatcaaatggaaagcgtgcaatga

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