Vibrio scophthalmi: VSVS12_00736
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Entry
VSVS12_00736 CDS
T04650
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_00736 (truB)
Enzymes [BR:
vsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VSVS12_00736 (truB)
Transfer RNA biogenesis [BR:
vsc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VSVS12_00736 (truB)
Prokaryotic type
VSVS12_00736 (truB)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ANS84531
UniProt:
A0A1B1NLJ5
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All DBs
Position
1:791333..792286
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AA seq
317 aa
AA seq
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MARRRKGRPIDGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPIDVDMAKLEACIETFRGESDQ
VPSMFSALKYQGKPLYEYARAGIEVPRESRKITVYEIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGELLGCGAHVTMLRRTAVAKYPYERMVTLEQLNELLEQAHREEIAPRELLDPLL
MPMDSAVEDLPEVNMNAELTDLVQHGMPVQVSGAPAEGTVRMTSGEEKLFIGVAQIDDRG
RVAPKRLVVFREQVEAE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccgtcgcaaaggtcgtccaattgatggcgttatcctattggataagccaacg
ggtatttcttcaaacgatgcgctacaaaaagttaagcgtatctattttgctgaaaaagcc
ggtcatactggcgctctagatccacttgcaactggcatgctgccaatttgcttgggtgaa
gcgaccaagttttcacagttcttacttgattcagataagcgctaccgtgtgatcgccaaa
ctaggtgaacgtacaaacacctccgattctgatggtgaagtggtagaaacgcgtccaatc
gatgttgatatggcaaagcttgaagcttgcattgagacattccgtggcgaatcggatcaa
gtaccttcgatgttctcggcactgaaataccaaggcaagcctttgtacgaatatgctcga
gcaggtatcgaagtccctcgtgaatcgcgtaaaatcaccgtgtatgaaatcgtgctgcac
cgctttgaaggcgatgaagtagagatggaagtgcattgctcaaaaggcacctacatccga
acaatcgtggatgatcttggtgaactacttggctgtggcgctcatgtgacgatgcttcgt
cgcaccgcagttgctaagtatccatatgagagaatggtgactcttgagcagttaaacgaa
ctgcttgaacaagctcaccgtgaagagattgcgccacgcgaactgcttgatccgttgcta
atgccaatggacagcgctgtggaagatctaccagaagtgaacatgaatgctgagttgacc
gatttggttcaacacggtatgcctgttcaagtctctggtgcgcctgcagaaggtacggtg
cgaatgaccagtggtgaagagaaacttttcatcggtgtcgcgcaaatcgacgacagaggc
cgtgttgcgcctaagcgtttggttgtgttccgtgagcaggttgaagctgaataa
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