Vibrio scophthalmi: VSVS12_00780
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Entry
VSVS12_00780 CDS
T04650
Name
(GenBank) Cyclic-guanylate-specific phosphodiesterase
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VSVS12_00780
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VSVS12_00780
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GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
ArlS_N
Motif
Other DBs
NCBI-ProteinID:
ANS84575
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All DBs
Position
1:complement(841701..844046)
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AA seq
781 aa
AA seq
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MKLNTRVLLLVAPVVLLSAAISSYGIYHNQKDALIKRETSYLQLTMEKLAGHFRQSFALL
NSYSQTITKSEMVRRYLHQQDNPFKEMELLTNMQRIISTLHSISQDTIGVAILDSQRKTQ
FFVDNQTDPFKQIDDKALQYVKDTYRLSGAQTHVGFSKNDQGQSLLISYNVLDPRTMEVP
LSYNKEEVYFLVVYLTLSQFDQLKHIIEFDNDSSLFFSDLPVNKSGLTQSVELKSALFAT
LDPAQYLLGDKLKAIENKLLISYVASSIATVLILLLLLYRHVTRPIAELEKQLLDVELRK
RYNIEKRDHNDELSRLSKRFYNMYQELHSSYQKTKALAENDHLTGLANRYQFQTFIETKL
SDNIRHHYAWILYIDLDNFKYVNDKYGHNIGDNLLINFAQHVKKVCRDWQNKHAIDCLAS
RLSGDEFAIFIASSQQDVYAESLAEAILEPLLVSGRSPLGNFPITASIGIAAYPSDGDNF
ASLLSNADTAMYQAKRAGKNQQSYYSKALDKSVRRRTQIERALRSGEFNKEFSLQYQPYY
NRTGDRIMGVEALLRWHSPKLGKVNPAEFIPISEQTGIFGLIDRWVIEQAFADFVEIQSM
FEHGIQLSINLSSAELDSHQLARDIEAMAHHYDVHPPLVDFEITETFATDSQSYSLLHEL
STMGFKLAIDDFGSGYTSITQLVEYPVQKIKLDREFLATLIKTDNRKVVKPLIELCHSQS
MIVTAEGIESQDMHQWLADNNCDYMQGYYLSSPVDLDQLKELVATQKAKVHDHPDRYRRF
A
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaacactagagtcttattgttggttgccccggtagtgttgcttagcgctgcc
atttcaagctatggcatttatcacaatcaaaaagacgcattgatcaaacgagaaaccagc
tatttgcaactcacgatggagaagctggctggtcactttaggcaatctttcgctctcctc
aatagctattcacaaacgataaccaaaagtgaaatggtccgtcgctacttgcatcagcaa
gataatccattcaaagagatggagttattgaccaatatgcagcgtatcatctctaccttg
cattccatttcacaagatacgatcggggtggccattcttgatagtcaacgcaaaacacaa
ttttttgtcgacaatcaaaccgacccatttaagcaaatagacgacaaagctctacaatat
gtcaaagacacatatcgcttgtcaggtgctcagacccacgtaggatttagtaagaacgac
caagggcaaagtcttcttatcagctacaacgtacttgatcctcgcaccatggaagttcct
cttagctacaacaaagaagaagtgtactttttggtggtctacttaactttaagtcagttt
gatcaactcaaacacatcatcgaattcgacaacgatagctcactgtttttttccgaccta
ccggtcaataaaagtggtttaacccagtcagttgaattgaagtcggcgctattcgcgacc
ctcgacccggcgcaatatttactgggtgataaacttaaagcgattgaaaataaattgctt
atttcctatgtcgcatcctcaattgccaccgtactgatcctattgctattactctatcgt
catgtcactcgtccaattgctgagttagaaaagcaattactggatgttgagttacgtaaa
cgatataacattgaaaaacgcgatcataatgatgagctcagtcggttatccaagcgcttc
tacaacatgtatcaagagctgcacagcagctatcaaaaaaccaaagcattagccgaaaac
gaccatctaaccggactggccaaccgctatcaatttcaaacctttattgaaacaaagctg
agcgacaatattcgccaccactacgcgtggattttgtatattgacctcgataacttcaaa
tacgttaacgataaatacggccataatatcggcgataatctcttaataaatttcgcccaa
cacgttaaaaaagtctgccgagattggcaaaataaacacgcgattgattgcttagcctca
cgcttatcaggggatgaatttgctatttttattgcttcatctcagcaagatgtctacgca
gagtcacttgcagaagccattcttgaaccattgttagtcagtggacgttcgccactaggt
aactttccgatcactgccagcattggtattgccgcctaccctagcgatggagacaacttt
gccagcctgctttctaatgccgatacggcaatgtatcaagccaagcgagccggcaaaaac
caacagtcgtattattccaaagcgctcgataagtccgttcgccgccgaacgcaaatagaa
agagcactgcgcagcggtgaatttaacaaagaattctcactgcaatatcagccctactac
aatcgaacgggtgataggatcatgggggttgaagcgctgctgcgctggcactcaccaaaa
ctcggcaaggtcaatccggcagaatttattccaatttcggagcaaacagggatctttggc
ctgatcgaccgttgggtgattgagcaagcattcgcggactttgttgaaatccaatcaatg
tttgagcatggtattcaactctcgataaacttatcatcggcagaactcgactctcatcaa
ttggctcgtgatattgaagcgatggcgcatcactatgatgtgcatccgccactggtagat
tttgaaatcacggaaacctttgccactgactcacaaagctactctttgttacatgagctt
tcgaccatgggctttaaattagcgatcgatgacttcggttctggctatacatctatcacc
caacttgtagaatacccagtacaaaaaattaaactggatcgcgaattcttagcaaccttg
atcaaaaccgataataggaaagtggtgaaaccattaattgaactgtgtcattctcagtcg
atgatcgtgactgccgaaggcattgagtcgcaagatatgcatcaatggttggcagataat
aactgtgactacatgcaaggctactacctttcctcccctgtcgacttagatcagttaaaa
gagctcgtcgccacacaaaaggctaaggtacatgaccacccagaccgttatcgtcgcttc
gcttaa
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