Vibrio scophthalmi: VSVS12_00790
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Entry
VSVS12_00790 CDS
T04650
Name
(GenBank) Chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
vsc03110
]
VSVS12_00790
Chaperones and folding catalysts [BR:
vsc03110
]
Heat shock proteins
HSP100
VSVS12_00790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_16
AAA_22
AAA_14
Sigma54_activat
nSTAND3
TniB
RuvB_N
AAA_18
ATPase_2
bpMoxR
AAA_24
IstB_IS21
AAA_7
NBD_SMAX1
AAA_19
NACHT
Torsin
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
ANS84585
LinkDB
All DBs
Position
1:852943..855516
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AA seq
857 aa
AA seq
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MRLDRFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALMDQNGSPIRPLLTMLNIDVTQL
RSKLSEMLDRLPKVSGIGGDVQLSGGMGTLFNLCDKVAQKRQDTYISSEIFLLAALEDRG
PLGALLKESGLTEQNLGEAIDKVRGGQKVNDPNAEELRQALEKFTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL
DMGALVAGAKYRGEFEERLKSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLK
PALARGELHCVGATTLDEYRKYMEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELH
HHVEITDPAIVAAASLSHRYVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKII
QLKIEQQALINEHDEASEKRLEMLNNELLEKERDFAELDEVWNAEKAALSGTQHIKSELE
QARMDMEFARRAGDLSRMSELQYGRIPELEKQLDLATQAEMQEMTLLRNKVTDVEIADVL
SKQTGIPVAKMLEAEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGS
FLFLGPTGVGKTELCKTLATFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSARIQENFNTLDYQGIKNEVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIAAIQLL
RLAKRMEERGYHMEVSEKALDLIAQVGFDPVYGARPLKRAIQQSVENPLAKAILSGRIIP
EKTVKLLVNNDQIIAHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcgacagatttactagcaagtttcaaatcgctatttctgatgcgcagtctttg
gcgctaggccgcgaccaccagtatatagagccagtgcacctaatggtggcactgatggac
caaaatggcagtccaattcgtccattgttgacgatgttaaatatcgatgtcactcaactg
cgttcgaaactgagtgaaatgctagaccgtctaccaaaagtgagcggcataggtggtgac
gtacaactgtcgggtggcatggggacgctgtttaacctgtgtgacaaagtggcgcaaaag
cgccaagacacctatatctcatcagaaatattcttattggctgctttagaagatcgtggc
cctcttggcgctttattaaaagaaagcggtttaaccgagcagaatttgggtgaagcgatc
gataaggtcagaggtggccaaaaggtcaatgacccaaatgccgaagaactacgccaagca
ttggaaaagttcaccgttgatttaaccgagcgagcagagcagggcaaacttgaccctgtg
attggtcgtgatgacgagatccgccgtactatccaagttttgcaacgtcgcaccaaaaat
aacccagtgatcattggtgaaccgggagtaggtaaaacggcgattgttgaaggtttggct
caacgcattatcaataatgaagtgccagagggcctaagaggtcgccgagtactgtctctc
gacatgggggctttggttgcgggagcgaaatatcgtggtgaattcgaagaacgtttaaaa
tcggtattgaatgagttgtctaaagaagagggtaacgtcattctttttattgatgaaatt
cataccatggtcggcgcaggtaaaggtgaaggttcgatggatgccggtaatatgctaaaa
cctgccttagcgcgaggtgagttgcattgtgtgggcgccactacgctagatgaataccgc
aaatatatggaaaaagatccggcacttgagcgtcgttttcaaaaagtgattgtcgatgaa
ccgagtgtcgaagataccgtcgcgattttgcgtggtctgaaagaacgttacgaactgcat
catcacgttgaaattaccgatcctgcgattgtcgcggcagccagcctatctcatcgttat
gtttccgatcgccagttgccagataaagccattgatttgatagatgaggcggcgtcgagt
attcgcatgcagatagattccaagcctgaatccctcgacaagctagagcgaaaaatcatt
cagcttaaaattgagcagcaagcacttattaatgagcatgatgaagcgagcgaaaagcgc
ttagaaatgctcaataatgaattgttggaaaaagaacgcgattttgctgaacttgatgaa
gtttggaatgcagaaaaggctgcgctatcaggcacccagcatatcaaatctgaacttgag
caagctcgtatggatatggagtttgctcgacgagcaggtgacttgagccgtatgtctgaa
ctgcaatatggtcgtatccctgagctagagaaacaactggatctcgccacgcaagccgaa
atgcaagagatgaccttattgcgtaataaggttactgatgtcgaaattgcagatgtacta
tcaaagcaaactggcattccagtggctaaaatgctggaggccgaaaaagaaaagctatta
cgcatggagcaagtactgcacaaacgcgtgataggacaaaaagaagcggtggaagttgtc
tctaacgcgattcgtcgcagccgtgcggggctatctgatcctaacaaacctattggttct
ttcttattcttgggcccaacaggggtcggtaagacagaattatgtaagaccttagcaacg
ttcatgtttgacagtgaagatgccatggtacgtatcgacatgtcagagtttatggagaaa
cattcggttgctcgcttagtgggagcccctccgggttatgtcgggtatgaagaaggtggc
tatttaaccgaagcggtacgtcgtaagccctattcagttattttgttggatgaagtagaa
aaggcgcaccctgatgtttttaacatcttactgcaagtgcttgatgatggacgactcact
gatgggcaaggtcgtacggtagatttccgaaataccgtcgtcatcatgacgtctaacttg
ggatccgcgcgtattcaagaaaacttcaatacgcttgactaccaaggtattaagaatgaa
gtgatggaagtggtgaataaacatttcaggccggaatttttaaaccgtgtagatgaaagt
gtcgttttccaccctcttggccaagagcatattaagtcgattgccgcaatccagctatta
cgtctggcaaagcgtatggaagagcgtggctatcatatggaagtttctgaaaaagcgctc
gatttgatagctcaagttggctttgaccctgtttatggggctcgccctttgaaacgagca
attcaacagagtgttgaaaacccattagcaaaagcaattttatcgggaagaattattcca
gaaaaaaccgtcaaattgctggttaataatgatcaaattattgctcatcaataa
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