Vibrio scophthalmi: VSVS12_00890
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Entry
VSVS12_00890 CDS
T04650
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc03030
DNA replication
vsc03430
Mismatch repair
vsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSVS12_00890 (dnaQ)
03430 Mismatch repair
VSVS12_00890 (dnaQ)
03440 Homologous recombination
VSVS12_00890 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsc03032
]
VSVS12_00890 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_00890 (dnaQ)
Enzymes [BR:
vsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VSVS12_00890 (dnaQ)
DNA replication proteins [BR:
vsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VSVS12_00890 (dnaQ)
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VSVS12_00890 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANS84678
LinkDB
All DBs
Position
1:950697..951440
Genome browser
AA seq
247 aa
AA seq
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MNTSNNSNQHRIVVLDTETTGMNQDGGPHYLGHRIVEIGAVEIIDRKLTGRHFHVYIKPD
REIQAEAVAIHGITDEFLRDKPEYRDVHREFLEFIQGAELVAHNAPFDVGFMDYEFEKLD
ASIGNTEQYCKVTDTLAMAKRIFPGKRNNLDILCDRYGIDNSHRTLHGALLDAEILADVY
LLMTGGQTTLQFNPGNGDGEGVGGESIKRASSQRKALKVLRATADEIEAHNSRLDIVEKS
GSCLWRQ
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagtaacaattcaaatcagcatcgcatcgtggttctcgataccgaaaccacc
ggtatgaatcaagatggcggcccacattaccttggccaccgcattgttgaaatcggtgcg
gtggaaatcattgaccgcaaattgacggggcgtcatttccacgtctacataaagcccgat
cgtgaaattcaagccgaagcggtggctatccacggtatcaccgatgaatttttgcgtgat
aaaccagaataccgtgatgtgcaccgcgagtttttagaatttatccaaggcgcagaattg
gtcgcgcataatgcgcccttcgacgtcggctttatggattatgaattcgagaagttggat
gcctcgataggcaatactgagcaatattgtaaggtgaccgatacccttgccatggcgaag
agaatcttccctggtaaacgtaataaccttgatattttgtgtgatcgctacggcatcgat
aactcgcaccgtaccctccatggcgcattgctcgatgcggaaatcctagccgacgtttac
ttattaatgacgggcggacaaaccactttacaattcaatcccggcaacggagatggtgaa
ggagtgggaggtgagtcaataaaacgagcttctagtcagcgaaaagcactaaaggtttta
cgcgctactgccgatgagatagaagcccataatagtcgtttagatatcgtagagaaaagc
ggaagctgcctctggcgtcaatag
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