Vibrio scophthalmi: VSVS12_00907
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Entry
VSVS12_00907 CDS
T04650
Symbol
glyA
Name
(GenBank) Glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00260
Glycine, serine and threonine metabolism
vsc00460
Cyanoamino acid metabolism
vsc00630
Glyoxylate and dicarboxylate metabolism
vsc00670
One carbon pool by folate
vsc00680
Methane metabolism
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
vsc01120
Microbial metabolism in diverse environments
vsc01200
Carbon metabolism
vsc01230
Biosynthesis of amino acids
vsc01240
Biosynthesis of cofactors
vsc04981
Folate transport and metabolism
Module
vsc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VSVS12_00907 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VSVS12_00907 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VSVS12_00907 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VSVS12_00907 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VSVS12_00907 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VSVS12_00907 (glyA)
Enzymes [BR:
vsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VSVS12_00907 (glyA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ANS84695
UniProt:
A0A1B1NM18
LinkDB
All DBs
Position
1:967455..968705
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKVETLAIERACELFGAEYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEKGQIDYEEMEALAVEHKPKMIIGGFSAYSQV
CDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQARVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPSITRRGFTEEDSKALAGWMCDILDNIGDESVIAATKVKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggatttgttcgcagctatccaa
gaagaaactcttcgtcaggaagagcacattgaactaatcgcttctgaaaactacaccagc
ccacgagtaatggaagcacagggctctcagctaactaacaagtacgctgaaggttaccca
ggtaaacgctactacggtggttgtgagtatgttgataaagtggaaacacttgcgatcgaa
cgtgcttgtgaactattcggtgccgaatatgccaacgtacagccacactcgggttctcaa
gctaataacgcggtttacatggcgctgcttaacgctggcgataccgttctaggcatgagc
ctagcgcacggcggtcacctaactcacggttcaccagtaaacttctctggtaagctttac
aacattattccttacggcatcgatgagaaaggccaaatcgattacgaagagatggaagca
ttagcggtagaacacaaacctaagatgatcattggtggtttctctgcttactctcaagtg
tgtgattgggcgcgtatgcgtgaaatcgcggacaaagtaggtgcttacttcttcgttgat
atggcgcacgtagcgggtcttatcgctgctggtgtttacccgaaccctgtaccgcatgcg
cacgtagtaaccacaacgacgcacaaaacgctagccggtccacgtggcggtctaatcctt
tctaacgaaggcgaagatctgtacaagaagctgaactcagcggtattccctggtggtcag
ggtggccctctaatgcacgttattgccggtaaagcagtggcgttcaaagaagcgctagag
ccagaattcaaagaataccaagcgcgcgttgttgctaacgcaaaagcaatggtggctgaa
ttccttgctcgtggctacaacatcgtttctggttcaactgagaaccacctgttcctagtt
gatctgatcgacaaagacatcacaggtaaagaagcggatgcagcactaggtgcggccaac
atcactgtgaacaaaaactcagtgccaaacgacccacgtagcccattcgtaacgtctggt
atccgtgttggctctccatcaatcactcgccgtggctttactgaagaagattcaaaagca
ttggcaggttggatgtgtgacatcctagacaacattggtgatgagtctgtgattgcagca
accaaagtgaaagttttagaaatttgtaagcgtctaccggtttacgcttaa
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