Vibrio scophthalmi: VSVS12_01012
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Entry
VSVS12_01012 CDS
T04650
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00541
Biosynthesis of various nucleotide sugars
vsc01100
Metabolic pathways
vsc01250
Biosynthesis of nucleotide sugars
Module
vsc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VSVS12_01012 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
VSVS12_01012 (kdsA)
Enzymes [BR:
vsc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
VSVS12_01012 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
Lipid A
VSVS12_01012 (kdsA)
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GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ANS84783
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Position
1:1058873..1059724
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AA seq
283 aa
AA seq
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MEQKIVRVGDIPVANDKPFTLFAGMNVLESRDLAMQICEHYVKVTEKLGIPYVFKASFDK
ANRSSVHSYRGPGLEEGMKIFQELKDTFGVKIITDVHTEAQAQPVADVVDVIQLPAFLAR
QTDLVEAMAKTGAVINVKKPQFMSPNQVGNIVDKFAECGNDKIILCERGSCMGYDNLVVD
MLGFGVMKKASNGSPIIFDVTHSLQMRDPSGAASGGRREQTVELAKAGLATGIAGLFIEA
HPNPDQARCDGPSALPLDKLEPFLKQMKDLDDLIKSFAHIDIK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaaaatcgttcgcgttggtgatattcctgttgctaacgacaaaccgtttact
ttgtttgctggtatgaatgttctagaatctcgcgatcttgcgatgcagatttgtgaacac
tacgtaaaagtgaccgagaagttaggtattccttacgtatttaaagcgtcttttgataaa
gcaaaccgtagctctgttcattcataccgtggccctggcctagaagaaggtatgaagatc
ttccaagagcttaaagatactttcggcgtgaaaatcatcactgacgttcacacagaagca
caggcacaacctgtagctgacgtcgttgacgtgattcagctaccagcattccttgcgcgc
caaactgacttggttgaagccatggcgaaaacgggtgcggtaatcaacgttaagaaacct
caatttatgagcccaaatcaagtgggtaacatcgttgataaatttgcagaatgcggtaac
gacaagatcatcttgtgtgagcgtggttcatgtatgggttacgacaacctagtggttgat
atgcttggttttggcgtaatgaaaaaagcatctaacggcagcccaatcatctttgacgta
acgcactcgctacagatgcgcgatccatctggtgccgcttctggtggtcgtcgtgagcaa
acggttgagctagcgaaagcaggcttggcaacgggtattgcgggtctgtttattgaagcg
catccaaacccagaccaagcacgttgtgatggtccatcagcgttgccactcgacaaactt
gaaccgttcctaaaacagatgaaagatctggatgatttgattaagagctttgctcatatc
gatatcaagtaa
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