KEGG   Vibrio scophthalmi: VSVS12_01030
Entry
VSVS12_01030      CDS       T04650                                 
Symbol
hsdS
Name
(GenBank) Type I site-specific deoxyribonuclease
  KO
K01154  type I restriction enzyme, S subunit [EC:3.1.21.3]
Organism
vsc  Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vsc02048]
    VSVS12_01030 (hsdS)
Enzymes [BR:vsc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     VSVS12_01030 (hsdS)
Prokaryotic defense system [BR:vsc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   VSVS12_01030 (hsdS)
SSDB
Motif
Pfam: Methylase_S DUF7281 TaqI_C DUF334 Spc24
Other DBs
NCBI-ProteinID: ANS84801
LinkDB
Position
1:complement(1079105..1080346)
AA seq 413 aa
MVPNYQNWEQKLFKSVLKLDRGSSPRPIVDFMTDADDGVNWIKIGDTKKGELYINSTKEK
ITPEGAKKSRKVSKGEIIVSNSMSYGQPYILNIDGYIHDGWFVIRNYEKHFEKNYLLQFL
GSELIQRQYKRLAAGGVVSNISSDLVYAVKATIPPLPEQRKIAQILSTWDKAIETTEKLI
VTSKQQKKALMQQLLTGKKRLVNPETGKAFEGEWERHSLSDLVYVDRKSLGKKTPDNFKF
KYISLSNVDFGMISKELEVHEFSTAPSRARRVLQDGDILMSTVRPNLKGFAKVTSCYADC
IASTGFAVLTPKKKVSGDYIYQYIFSAHVTGQIDSLVVGSNYPAINSSDVSGLKVYCPAF
EEQQKIASVLTAADKEIEFLEAKLAHLKEEKKALMQQLLTGKRRVKVSETEAA
NT seq 1242 nt   +upstreamnt  +downstreamnt
atggtgcctaattaccaaaactgggagcaaaaattattcaaaagtgtattaaaactcgat
agaggcagttcgcctagaccgattgttgattttatgacagatgcagatgacggcgttaac
tggattaaaattggagacacaaaaaaaggcgagctgtacataaactctactaaagagaaa
attacacctgaaggagcgaagaaatctagaaaagtatccaaaggtgaaataattgtctct
aactctatgagttacggccaaccatatatattgaatattgatggttatattcatgatggc
tggtttgttataagaaactatgaaaagcactttgaaaaaaactatttgcttcagtttctt
gggtcagagctaattcaaagacaatataagagattagctgcgggtggagttgttagtaat
atcagtagtgacttggtttatgcggttaaagccacaattcctccactcccagaacaacgc
aaaatcgcccaaatcctttctacatgggataaggcgattgaaacaacagaaaagctgatt
gtaaccagcaagcagcagaaaaaagctttaatgcagcagttgttgacgggtaaaaagcgt
ttggttaatcctgagacgggtaaggcgtttgagggggaatgggaacgacattcgttatct
gatttggtatatgttgatagaaaatcattaggaaaaaaaacacctgataattttaagttc
aaatatatatcactatcaaatgttgattttgggatgatttcaaaagagcttgaagtgcat
gaattttcaaccgcaccttcacgtgctcgtcgagttttgcaagatggtgatatcttgatg
tctactgtgcgaccaaatttaaaagggtttgccaaagtcacatcctgctacgctgattgt
attgcctcaactgggtttgctgtacttacaccgaaaaagaaagttagtggtgattacatc
tatcagtacatatttagtgctcacgttacaggtcagatagacagccttgtggttggctca
aactatccagcgattaactcttctgacgtttcaggtctaaaagtttattgccctgcgttt
gaagaacaacaaaaaatcgcatcagttctcactgctgccgacaaagaaatcgagttctta
gaagccaagcttgcgcacttgaaagaagagaaaaaagcgttgatgcagcaactattaaca
ggcaagcgtcgcgttaaagtttctgaaaccgaagccgcttaa

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