Vibrio scophthalmi: VSVS12_01149
Help
Entry
VSVS12_01149 CDS
T04650
Name
(GenBank) Putative aga operon transcriptional repressor
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsc03000
]
VSVS12_01149
Transcription factors [BR:
vsc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
VSVS12_01149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_5
HTH_PafC
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ANS84916
LinkDB
All DBs
Position
1:1208327..1209073
Genome browser
AA seq
248 aa
AA seq
DB search
MVGVRGKMHVDELADYFNVTGATIRADLRFLDENGYIVRSHGFALVNRAVLSKLAMSATS
KSQNASSDFYDYVAQSFHSALEEKSTIFIDSSPLIRRALKHVKDLKSSTVITRDLNLIQN
IPHITDCKFFVTGGRVNTEQMKMSGSHMINSLKQYRFNNVLIHVESFNTKLGVFSKSEFD
AEMIRLLCKLSERVTIIAESSAFIHNDSFWACEPNEIDTVITDYDLDDETKKSLELNNVK
IFKLSSNN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggttggcgtgcgtgggaaaatgcacgtggatgaacttgctgattattttaatgtgaca
ggggcgacgattcgggctgatcttcgttttcttgatgaaaatggttatatcgttcgctca
catggatttgctttagttaaccgtgctgttctatccaaacttgcgatgtcggcgacatcc
aaaagccaaaatgcaagttcagacttttatgattatgtcgctcagtcatttcatagtgcg
ttggaagagaaaagtacgattttcatcgatagcagtcctttgataagaagagcgttgaag
catgtaaaagatctcaagagttcgaccgtgattacccgagatctcaatttaattcaaaat
atccctcatataacggattgtaagtttttcgttaccggtgggcgtgtgaataccgaacaa
atgaaaatgtccggttcacatatgattaatagtttaaaacagtatcgatttaataatgtt
ctcattcatgttgaaagttttaatactaagttaggtgttttctccaagagtgagtttgat
gctgaaatgattcgtttgttatgtaagttatctgagagagtcacaattattgctgagtct
tcagcatttattcataacgattcattttgggcatgcgaaccgaatgaaatagatactgtt
atcacagattacgatttggatgacgaaactaaaaagtcattggaattgaataatgtaaaa
atttttaaactaagttctaataattaa
DBGET
integrated database retrieval system
