Vibrio scophthalmi: VSVS12_01157
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Entry
VSVS12_01157 CDS
T04650
Name
(GenBank) Pectin degradation repressor protein KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsc03000
]
VSVS12_01157
Transcription factors [BR:
vsc03000
]
Prokaryotic type
Helix-turn-helix
IclR family
VSVS12_01157
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
MarR
HTH_11
HTH_5
Fe_dep_repress
TrmB
Mga
HTH_DeoR
HTH_24
PadR
FUR
HTH_6
Motif
Other DBs
NCBI-ProteinID:
ANS84924
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Position
1:complement(1215353..1216135)
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AA seq
260 aa
AA seq
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MEKTTQPEAVSSVMKVFSILQALGEQKDIGVSELSQRLMMSKATTYRFLQTMKMLGYVSQ
EEEADKYGLTLKLFELGAKSLEYVDLIALADKEMRYISEQTNEALHLGALDDDAIIYIHK
IDSGYNLSMQSRIGRRNPLYSTAIGKVLLAERDVEFVERTLADVTFVKHTEKTLQNTTQL
LTELELVRQQHYAEDNEEQEPGLRCIAAPIYDRFGQVIAGLSISFPTIRFDQERLSYYVE
MLQTAGHNISRQLGYDVNNQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacaactcagcctgaagccgtctcttcagtaatgaaggtatttagtattctt
caggcattaggcgaacaaaaagacattggtgtctctgagctttctcagcgcttaatgatg
tctaaagcgacaacctatcgcttcttacaaaccatgaaaatgttgggttacgtttcccaa
gaggaagaagccgataaatatggcctcaccttgaaactgtttgaattgggtgcaaaatcg
cttgagtatgtcgatcttatcgccttagccgacaaagagatgcgctacatctctgagcaa
accaatgaagcgctccaccttggtgcattggatgacgacgcgattatctacatccataaa
atcgattctggctacaacctcagtatgcaatcacgcattggtcgccgcaatccactgtat
agtactgcgattggtaaagttttattggctgaacgtgacgtagagttcgttgagcgaacg
cttgccgatgtaacgtttgtaaaacacaccgaaaaaaccttacaaaatactacgcaattg
ctgacagaacttgagttagtccgccagcagcattacgccgaagacaacgaagaacaagag
ccggggttacgctgcatcgccgcaccgatttatgatcgctttggtcaggtcatcgcaggg
ctttcgatttcattcccgaccattcgttttgatcaagagcgactctcttactatgttgaa
atgctgcaaaccgcaggtcacaacatatcaagacagttaggctatgatgtgaacaatcaa
taa
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