Vibrio scophthalmi: VSVS12_01274
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Entry
VSVS12_01274 CDS
T04650
Name
(GenBank) putative HTH-type transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsc03000
]
VSVS12_01274
Transcription factors [BR:
vsc03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
VSVS12_01274
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
FaeA
GntR
HTH_PafC
HTH_9
Motif
Other DBs
NCBI-ProteinID:
ANS85041
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All DBs
Position
1:complement(1334809..1335585)
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AA seq
258 aa
AA seq
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MTSAERRQKIMAHIRNHGTGKVDEFVSQFNVSAVTIRHDLNLLEKEGCVFRCYGGANLNP
NFAFDQPLYRKDQLNRSAKQSIALAAANLVGDGEAIILDSGTTIGLMPQYLTNKKQLVVM
TNALNTAYQLSSIETIDLHVVGGSLRRASCSLIGHHGEQQIRSYLFDKLFLGVDGFDLQT
GITTPDNHEAQINRAMCDVARQVIAVTDSSKFGRKSFCMIRAANQIDVLVTDSNIPHATH
QALLEMGVDVILADQTVN
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgcagagcgaagacagaaaatcatggcgcatatccgtaaccacggaactggc
aaagtggatgaatttgtcagccagtttaatgtgtctgcagtgaccattcgtcatgatctc
aacttactggaaaaagaaggttgtgtttttcgctgttatggtggcgccaatctcaacccc
aactttgccttcgatcaaccactgtatcgtaaagaccaactcaatcgcagtgccaaacaa
tccattgcactggctgcggcgaacttagttggcgatggtgaagcgatcatcctcgattct
ggcaccaccattggcttaatgccgcaatacctaaccaataagaagcaattggtggtaatg
accaacgcgctcaataccgcgtaccaactcagcagcatcgagacgatcgacttacatgtc
gttggcggcagcttacgtcgcgcatcgtgttctttaattggccatcacggtgaacaacag
attcgctcttatttattcgataagttgtttttgggcgttgatggcttcgatcttcagacc
ggcattaccaccccagacaatcacgaagcacaaatcaaccgagcgatgtgcgatgtagcg
cgacaagttatcgccgtcacagactccagcaaatttggccgtaagagcttttgcatgatc
cgtgccgccaaccaaattgatgtgctcgtcactgacagcaatattccacacgccactcac
caagccctgcttgaaatgggtgtcgacgtcattctcgccgaccaaaccgtaaattag
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