Vibrio scophthalmi: VSVS12_01285
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Entry
VSVS12_01285 CDS
T04650
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acidsynthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00130
Ubiquinone and other terpenoid-quinone biosynthesis
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
vsc01240
Biosynthesis of cofactors
Module
vsc_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
VSVS12_01285 (menD)
Enzymes [BR:
vsc01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
VSVS12_01285 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Oest_recep
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ANS85052
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Position
1:1344483..1346222
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AA seq
579 aa
AA seq
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MSSIANRDQAVMNRIWCQVLLEELTRFEVEHICVAPGSRSTPLTLEADENPNLTLHTHYD
ERGLGFLALGLAKASRKPVAIVVTSGTAVANLLPAIAEAKLTGEKLVVLTADRPVELVAC
GANQAIVQQGIFSSHVTAALNLPSPNEQVSLRWLLTSIDDVMARQARDGSAVHINCAFPE
PLYSKQPKSIYQSYLDDVALWQQSNQRYSQQLSGAGAHFDCQHWRGRKGFIVVGSVSQAE
AKLAQTLAQRLGWPILCDVQSGTSSAWAHFDIWLQSEAGQKALSGAELVLQVGSRVISKR
LNHWLSQTQLGTDALTKAPFEYHYLSPSIDRNNQDHLMQTHHHADISIWLTHAINQFDAD
EPLCDWANELSQFSGAVNRAAKWHVEASVELNEVALATTLNQLPSAVNIFLGNSLFVRLV
DMFGEVAHEVYSNRGASGIDGLVATTTGTARATNQPTVLYIGDTSLLYDLNSLALFTHQQ
TPCAIVVTNNDGGAIFGLLPVPEQQKQQLYQMPHGYDFSAAAAQFKLAYYQADQQEAYQA
KLEQHLTSGQGCLLIEVTTPPEQASAHIKEVVNRFHASL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtattgccaatcgtgaccaagcggtgatgaaccgtatttggtgtcaggtgtta
ttggaagaattgacccgttttgaggttgaacacatctgtgtcgcaccaggctctcgttct
acgccgctaacgcttgaagccgatgaaaacccgaatttaaccctgcacacacattatgat
gaacgtgggcttggttttttggctttaggtcttgccaaagcgagccgtaagcctgttgct
attgttgtgacatccggcaccgcggttgctaatttattgcccgcgatagctgaagcaaaa
ctgactggtgaaaagctggtggtactcaccgcagaccgcccggtggagcttgtcgcttgt
ggtgccaatcaagcgatcgtgcaacaaggtattttttctagccatgtgactgcggctctc
aaccttcctagtccaaatgagcaagtctcgctgcgttggttgttaacctcgattgatgat
gttatggcaagacaagcccgtgacggcagtgcggtgcatattaattgtgctttccctgag
ccactttattccaagcagccaaagtcgatctatcagagctatcttgatgatgttgcctta
tggcagcaaagcaatcaacgctatagccagcagttatctggtgccggagcacactttgat
tgccaacattggcgtgggcgcaaaggctttattgtggtcggcagtgtatcgcaagcggaa
gcgaaattagcgcaaaccctcgcccagcgtttagggtggcctattttatgcgatgtacaa
tcgggtacgagcagtgcgtgggcacattttgatatttggctgcaaagtgaagcgggccaa
aaggcgctgagtggagctgaattggtgctacaagttggttcgcgcgttatatctaagcgt
ttgaatcactggctatcgcaaactcaattgggtactgatgccttaactaaagcgccattt
gagtatcactatctcagcccaagtattgatcgcaataaccaagatcatttgatgcagact
catcatcatgctgatatctccatttggttaacgcatgctattaatcagtttgatgcggat
gaaccgctttgtgattgggcgaatgagctgagccagtttagcggtgcggtgaatcgtgcc
gccaagtggcatgttgaagcatcggtggaactgaacgaagttgcgttagcgaccacgtta
aaccaactcccttctgcggtgaatatcttcttaggcaacagtctatttgtgcgtttagtt
gatatgtttggcgaagtggctcatgaagtctactctaaccgtggagcctcgggcattgat
ggcctagtggcgacaacgaccgggacggcgagagccaccaatcagccaaccgtactctat
attggtgatacatcgttgttgtatgatctcaattcattggcgctgtttacccatcaacaa
actccttgtgcgattgtggtgactaataacgatggcggcgctatttttggtttgctaccg
gttcctgaacagcaaaaacagcaactttatcaaatgcctcatggttatgatttttctgcc
gctgccgctcaatttaaactggcttactatcaagctgaccaacaggaagcctaccaagct
aagctagagcagcatctgacgtcagggcaaggctgtttacttattgaagtgacaacgcca
ccagagcaagcttcagcgcacatcaaagaggttgttaaccgcttccatgctagcttatag
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