Vibrio scophthalmi: VSVS12_01308
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Entry
VSVS12_01308 CDS
T04650
Symbol
vieA
Name
(GenBank) Cyclic-guanylate-specific phosphodiesterase
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VSVS12_01308 (vieA)
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VSVS12_01308 (vieA)
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GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Terminase_5
Pol_alpha_B_N
Sigma70_r4
HTH_23
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ANS85075
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All DBs
Position
1:complement(1373428..1375167)
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AA seq
579 aa
AA seq
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MQILIIEDDIIQATKLKLSLMALGYHHIALTRDAQSALEICQRQNIEFIICDINLPDMDG
IQFLATLSNHSLNIGIAIHSAMREDVIELTSNMCIAAGFKFVDTINKPHSVSALQTMFER
FESRKLQSTEDANHICLSEQEVIDAFEQNWFANYYQPQFSVHSKRIIGVESLIRCLHPRF
GVLTPASFLTTIHQMGLSDQLFWHVAEKAIAAVALLQQDISLSINVSQSNFEDDMCDRLL
ALCERYQFSPKRLVLELTEYEVYDYSRNSLANLARLRMHGICLSIDDFGTGHASLSQLAL
LPFTELKIDRSFIKDVTSNYRNQQLTSMCVQLANSLGLHCVVEGIEDEATLQYLNSLGVD
SYQGFYACKPLPIAALWEFVSHYQDIEHEAAELQPLHDAVILSPNTSSSHAITKAMGKDA
IFGRIFTYKGINQLLENDEIQKVSLLVIDIDFLDCDVNELLANLNSTNFIGSVCLLEGNN
PVEITITNHNYHCFKANKNPRYIQTIASILSDRDKSSIQKIYQLLSTQEINVANLLLKGF
NNKKVATTLDISEKTVSTYKNRIFKKLEIQSIVELAQFR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatacttataattgaagacgacattattcaagcaactaagcttaaattgtcactc
atggcgctcggatatcatcacattgcactcactcgtgatgctcaatcagcgcttgagatc
tgtcagcgacagaacatcgaattcattatttgtgatatcaacttgccagacatggatggt
attcaatttcttgcaaccctctctaaccactcgctcaatattggcatcgcgatccacagt
gccatgcgtgaggacgtgattgagctgacgagcaacatgtgtattgccgctggttttaaa
tttgttgataccatcaataagcctcattccgtctccgctttgcaaactatgttcgaacgc
ttcgaaagccgtaagctgcaatcgactgaagatgccaatcatatttgcttgagtgaacaa
gaagtcattgatgctttcgaacaaaattggttcgctaactactatcaaccgcaattcagt
gttcatagcaaacgtatcatcggtgtagagtcactgatccgctgcttacacccgcgtttt
ggggtgcttaccccagccagtttcctaacgactattcatcaaatgggcctaagtgaccaa
ttgttttggcacgtagcagaaaaagcgatcgcagctgtggcactgcttcagcaagacatc
agcctatcaatcaatgtcagccaatcaaattttgaagatgacatgtgtgaccgcttactg
gcgttatgtgaacgataccaattctcgccaaaacgcctcgtactcgaactaaccgaatac
gaagtgtatgattactcgcgcaattcactggccaacttggctcgtttgcgcatgcatggc
atttgcttatcgatcgatgattttggcactggccacgcctcgcttagtcagttggcatta
ttgcctttcaccgaactcaaaattgatcgtagctttattaaagatgtgacgagtaactat
cgtaaccagcaattgacaagtatgtgtgtgcaattggccaattcgcttggcttgcactgc
gttgtcgaaggtattgaagacgaagcgacacttcaatatctcaacagtttaggggtcgac
agctatcagggcttctatgcctgtaaacctctccctattgctgccttgtgggagtttgtc
tcgcattatcaggatattgaacatgaagcggcagagctgcaaccattgcatgatgccgtg
attcttagcccaaacacctcatcctctcacgccattaccaaagcgatgggtaaggatgcg
atcttcggccgaatctttacttataaaggcatcaatcaattacttgaaaatgacgagata
caaaaagtcagcttattagtgattgatatcgattttcttgattgcgatgttaacgaatta
ctcgccaacttgaactccaccaatttcattggttcagtgtgcttgttggaaggtaataac
cctgttgaaattacgatcactaatcacaattaccactgctttaaagccaataaaaatccg
cgctacattcagacaatcgcatcgatattaagcgaccgtgataaaagcagtattcagaag
atctatcagttgctgtcgacgcaagaaatcaacgtcgccaatttattactaaaaggcttt
aacaacaaaaaagtcgccaccacgctcgacattagcgagaaaacggtgagtacttataaa
aatagaattttcaaaaagctggaaattcaatctattgtcgagttagcacagtttagataa
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