Vibrio scophthalmi: VSVS12_01369
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Entry
VSVS12_01369 CDS
T04650
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00541
Biosynthesis of various nucleotide sugars
vsc01100
Metabolic pathways
vsc01250
Biosynthesis of nucleotide sugars
Module
vsc_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VSVS12_01369 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
VSVS12_01369 (kdsB)
Enzymes [BR:
vsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
VSVS12_01369 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
vsc01005
]
Lipid A
VSVS12_01369 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DacZ_P
Peptidase_M29
NTP_transferase
DUF2064
ADH_zinc_N
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
ANS85136
UniProt:
A0A1B1NN89
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Position
1:1455683..1456432
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AA seq
249 aa
AA seq
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MSFTVVIPARYQSTRLPGKPLADIGGKPMVQWVYEQAVQAGADQVIIATDDERVEQAAKA
FGAQVCMTSPNHESGTERLAEVVKLMGIADDHIIVNVQGDEPLIPPSIITQVADNLANSQ
APMSTLAVEISDEAEVFNPNAVKVLTDKDGYAMYFSRATIPWDRDNFANNNTIAQPLLRH
IGIYAYRAGFINTYINWQPSALEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLQ
AVRDIIANR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttacggttgttattccagctcgttatcaatcgacgcgcttgccgggtaagcct
cttgctgatattggcggtaagccgatggtgcaatgggtatatgagcaagccgtacaagcg
ggtgccgatcaagtgatcatcgcgactgacgatgagcgtgtcgagcaagctgcgaaagcg
tttggtgcgcaagtgtgcatgacgtcaccgaatcacgagtcgggtactgaacgtttggca
gaagtggttaagctgatgggcattgccgatgaccacatcatcgttaacgttcaaggtgat
gaacccctgatcccgccatcaatcatcactcaagtggcagacaacttggctaatagccaa
gcaccgatgtcgactttggcggtagaaattagcgatgaagcggaagtctttaacccgaac
gcggttaaagtattgactgacaaagatggttacgcgatgtatttcagtcgcgcaaccatt
ccttgggatcgcgacaattttgctaacaacaataccattgctcagccattactgcgccat
atcggtatctatgcttatcgtgcaggctttatcaatacctacattaactggcagcctagt
gcgcttgagaaaattgagtgcttagagcagttgcgagtgctgtggtacggtgaaaaaatt
catgttgccgttgcgaaagaagcaccggcagcaggggttgatacaccagaagatcttcaa
gcggtgcgcgatattatcgctaaccgataa
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