Vibrio scophthalmi: VSVS12_01574
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Entry
VSVS12_01574 CDS
T04650
Symbol
glcD
Name
(GenBank) (S)-2-hydroxy-acid oxidase
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00310
Lysine degradation
vsc01100
Metabolic pathways
vsc01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
VSVS12_01574 (glcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
Fer4_20
Fer4_17
BBE
Fer4_4
Fer4_9
Fer4_7
Fer4_10
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ANS85341
UniProt:
A0A1B1NNW1
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All DBs
Position
1:1719001..1722027
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AA seq
1008 aa
AA seq
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MLPRLHSQPDVDHVVLSFLEELKAAGFTGDIETQYASRLAVATDNSVYQLLPQAIVHPKS
TEDVALIGQISIKPVYERVKFSPRGGGTGTNGQSLTQGVVVDLSRHMNKVLEINEHEGWV
RVQTGVVKDQLNDAVRPFGYFFSPDLSTSNRATLGGMINTDASGQGSLKYGKTSDHVLSL
QAVFADGSILESDLSNGLPNQHTYAAHALQVTEQVCRDKRADIVAKFPPLNRFLTGYDLK
NAIDESSDQFDLTRVLCGAEGSLAFITEAKLNLTKIPKARILVNVKYNSFDSALRNAPFM
VDAQALSVETVDSKVLNLAKEDIVWHTVSDLITDVPDKEMLGINMVEFAGQDIAEVEGQL
SALTARLDEMLVNEEAGIIGYQVVNDVASIGKIYNMRKKAVGLLGAAKGRAKPVAFAEDT
CVPPENLADFIDEFRQLLDEKQLNYGMFGHVDAGVLHVRPALDMCDPLQEKLMHEISDQV
VKLVAKYGGLMWGEHGKGFRSEYGPEFFGEALFTELRRVKSAFDPHNKMNPGKICTPLES
HEQLVKVSDTKRGFYDRQIDVKVRDSFKQAMECNGNGLCFNYDTASPMCPSMKVTADRRH
SPKGRAGLVREWLRQLTEQGIDILDLEKQSLESASVKTLLDRVRNSFNKRHQYDFSHEVY
EAMNGCLACKACASQCPIKVDVPSFRSRFLNIYYSRYQRPAKDYLVANIETMLPLMAKAP
KLVNGVLKQKWVQSLTASTVGYVDAPLLSIPTLAKRVTQLKAFDMQALAAMSSEDKANHV
LIVQDPFTSYYDADVVDDFVQLVIKLGKTPVLLPFKPNGKAQHIKGFLAQFARNAKSTAM
FLEQVADLSIPMVGVDPALVLCYRDEYNEILGDKRGEFDVLTVHEWMLPRLNEFHTGSGD
AQPWHLLAHCTEKTKLPNAEKEWGAIFNHFGAKLNTVPVGCCGMAGTFGHEVDKLEMSKD
IFALSWKPRLEELPADRCLVTGYSCRSQVKRFEHVKTKHPLQALLEIV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaagacttcattctcaaccggatgttgatcatgttgtgcttagttttctagaa
gaactaaaagcggcaggattcaccggtgatatcgaaacgcaatacgctagccgtttagct
gtagcgacagacaacagtgtctatcaattactaccacaagcgattgttcaccctaaatcc
actgaagatgtggcactgattggtcaaatcagtatcaaacccgtttatgagcgagtgaag
ttttctcctcgtggcggcggcacaggtaccaacggtcaatcattgactcaaggcgtggtc
gtcgatctttctcgtcacatgaataaggtgcttgagataaatgagcatgaaggttgggta
cgtgtgcaaactggggtggttaaagaccagttaaatgacgccgttcgcccgttcggctac
tttttctctcccgatctatcaaccagtaatcgtgccacgcttggcggcatgattaacacc
gacgcgtcgggacaaggctcattaaagtacggtaaaacctctgatcacgttctatcattg
caagccgtgtttgccgatggctccattttagaatctgatttatctaacggcctaccgaat
caacatacttatgccgctcatgctctacaagtgaccgagcaagtgtgtcgtgataaacgc
gcagacatcgtggcgaaattcccaccattaaaccgttttttaaccggttacgatttaaaa
aatgctatcgatgaaagtagcgaccaatttgacctaactcgcgtgctatgtggcgctgaa
ggttcgttggcgtttattaccgaagccaagctaaatcttaccaaaattcctaaagcgcga
atcttagtcaatgtgaagtacaacagctttgactctgcactgcgtaatgcgccatttatg
gtggatgcgcaagcgttgtcggtcgaaacggtcgattcaaaagtccttaacctggcgaaa
gaagacattgtttggcataccgtcagcgacttaattactgatgtaccagataaagagatg
ctgggcatcaatatggtcgaatttgcgggccaagatattgcggaagtagaagggcaactc
agtgcgctaacggcgcgtcttgacgaaatgttggtcaatgaggaagcgggtattattggc
taccaagtagtgaatgatgttgctagcattggcaaaatttacaatatgcgcaaaaaagct
gtgggcttgcttggcgcagcaaaaggccgagccaaaccagtcgcttttgccgaggatacc
tgtgttccaccagaaaatctggcggattttatcgatgaatttcgccaactattagatgaa
aaacagcttaactacggcatgtttggtcatgttgatgctggggtattgcacgttcgtcca
gcgctcgatatgtgtgatccattgcaagagaaattgatgcatgagatctccgatcaagtg
gttaagctggtggccaaatatggcggtttaatgtggggggagcacggcaagggcttccgg
tctgaatatgggccagaattctttggagaagcgctgtttaccgagcttcgccgcgtgaaa
tctgcctttgacccacataataagatgaacccaggcaagatctgtacaccacttgaaagc
cacgaacagttggtaaaagtgtctgacaccaaacgcggtttctacgatcgccaaattgat
gtcaaagtgcgcgacagcttcaaacaggcgatggagtgtaacggtaacggcttatgcttt
aactacgataccgcttcaccaatgtgcccatcaatgaaagtgactgcggatcgtcgtcat
tcaccaaaaggccgagcgggtttggtacgtgaatggctgcgtcaattgacagagcaaggc
attgacatccttgatctcgaaaagcaatcgcttgaatcggccagtgtaaaaacgctgctt
gatcgtgtacgtaatagttttaataaacgccaccaatacgacttctctcatgaagtgtat
gaagcaatgaatggttgtttagcctgtaaagcgtgtgcaagtcagtgcccaataaaggta
gatgtaccaagcttccgttcgcgtttcttaaacatctattacagccgctaccagcgacca
gctaaagattatttggtcgccaatattgaaaccatgttgcctttgatggcgaaagcacca
aaattggtcaacggcgtactcaagcaaaagtgggtacaaagtttaactgcttcaacggtt
ggctatgttgatgcaccactcctttctattcctacgctggcgaaacgagtgacacagtta
aaagcgtttgatatgcaggcgttggcggcgatgtcgagtgaagataaagccaatcatgtg
ttgatcgtgcaagatccatttaccagttactacgatgcagatgtggtggatgactttgtt
caactggtgattaagctgggcaaaacgcctgtgctactgccattcaaaccaaacggtaaa
gcgcaacatattaagggcttcttagctcagtttgctcgcaatgccaaaagtactgcgatg
tttttagaacaagtggccgatttgagtattccaatggtgggtgttgatccggcattggtg
ctttgttatcgcgatgaatataacgaaattctgggtgataagcgtggtgagtttgatgtt
ctgacagtgcatgaatggatgttgccacgtttgaatgagtttcatactggctcaggtgat
gcccagccttggcatttattggcgcattgtactgagaaaacaaagctgccgaatgctgag
aaagaatggggcgcgatctttaaccactttggggctaagctcaatacagtgcctgttgga
tgttgtggtatggcaggtacttttggtcatgaagtggataagctggaaatgtcgaaggat
atttttgctttaagttggaaacctcgtttggaagagcttccagcagatcgttgcttggta
acgggttactcttgtcgcagccaagtaaagcgctttgaacatgtgaaaacaaaacaccca
ttgcaagccttgttagagatcgtttaa
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