Vibrio scophthalmi: VSVS12_01819
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Entry
VSVS12_01819 CDS
T04650
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsc03032
]
VSVS12_01819 (gyrA)
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_01819 (gyrA)
Enzymes [BR:
vsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VSVS12_01819 (gyrA)
DNA replication proteins [BR:
vsc03032
]
Prokaryotic type
DNA Topoisomerases
VSVS12_01819 (gyrA)
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VSVS12_01819 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ANS85585
LinkDB
All DBs
Position
1:complement(2006277..2008937)
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AA seq
886 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDIAVYESIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAGELLTDLEKETVDFVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVIDGCLAYINNEEITIDELMDYIPGPDFPTAALISGRKGIVDAYKTGRGKI
YMRSKAEIETEKNGRETIIVSEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYAQTQLQTTFGINMVALDHGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELKKARERAHILEALALALANIDEIIELIRNAATPAEAKAGLIARGWDLGNVA
AMLESAGNDAARPDWLEPEFGIRDGQYFLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELELVREAYGDARRTEITAASHDIDMEELIAREDVVV
TLSHEGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPLASRTARGKPIVNILPLEEGERITAILPVSEFSADKFIFMATGDGTVKKTPLN
QFANVRSNGLIAVNLRDDDSLIGVDITDGQSDIMLFSKAGKVVRFSEDKVRAMGRTAAGV
RGMRLADEDQVVSLIVPSNEGDILTVTQNGYGKRTELAEYPTKGRATQGVVSIKVSERNG
PVVGAVQVEEGDEMMMITDAGTLVRTRVAEVSQVGRNTQGVTLIRTAADENVVGLQRIDE
IDEVELLEGEEGEVVEATASEEAPQVTNTELNDSAEDDAAEDDSEA
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttagctaaagagatcacgcccgtaaacattgaagatgagcttagaggttca
tacctcgactacgcgatgtcagtcatcgtgggtcgtgctcttcctgatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttctattcgcgatgaatgtactaggcaacgattggaat
aaaccatataaaaaatctgcccgtgttgttggcgacgtaatcggtaaatatcacccacac
ggtgatattgcagtatacgaatcgattgttcgtatggcgcagccgttctcactacgctat
atgctagttgacggccaaggcaactttggttcagtcgatggcgattcagcagcggcaatg
cgttacaccgaagttcgtatgtcaaaaatcgccggtgagttgttgacggatcttgagaaa
gaaactgtcgatttcgtaccgaactatgacggcacggaacagatcccagcggttctaccg
acaaaaattcctaacctattggtaaacggttcatccggtatcgcagtaggtatggcaaca
aacattcctccgcataacctgacggaagtgattgacggctgtttggcatacatcaataac
gaagaaattacgattgatgagctgatggattacatcccaggcccagacttcccaactgct
gctttgatcagcggccgtaaaggcatcgtcgatgcatacaaaacgggtcgcggtaagatc
tacatgcgctcaaaagcggagattgaaactgagaaaaatggtcgcgaaaccattattgtt
agtgaaatcccgtaccaagtgaacaaagctcgcttgattgaaaaaatcgcggagctggtt
aaagacaagaaagtagaaggcatcagtgcactacgtgacgaatctgataaagatggtatg
cgtattgttattgaatgtaagcgtgatgcagtcggtgaagtggttctaaacaacctttac
gctcaaactcagctgcaaacgactttcggtatcaacatggttgcgctagaccatggtcag
cctaagctattcaacctaaaagagatgttgaagtgcttcgttgaccaccgccgtgaagtg
gtgactcgccgtactatctttgaattgaagaaagcacgcgaacgcgcacatatccttgaa
gcgcttgcgcttgctctggcgaacatcgatgaaatcatcgagctgattcgtaacgcagca
acaccagcggaagcaaaagcagggctaattgctcgtggttgggaccttggcaacgtagca
gcgatgcttgaaagtgctggcaacgacgcagcgcgtccagattggttagagccagagttc
ggtattcgtgatggccaatacttcttaactgagactcaagcacaagccattctagaactt
cgtctacaccgtctaaccggtttagagcacgagaagattctagatgaatacaaagcacta
ctagaagaaatcgctgagctaatgcatatccttgcaagcactgagcgtttgatggaagtg
attcgtgaagagcttgaattggtacgtgaagcttacggcgatgctcgtcgtacagaaatc
accgccgcaagtcatgacatcgacatggaagagctgattgcacgtgaagacgttgtggtt
acgctatctcatgaaggttacgttaagtaccaaatcctaagtgactacgaagctcaacgt
cgtggtggtaaaggtaagagtgcaacgaagatgaaggaagaggattacatcgagcgtctg
cttgttgccaatactcacgataacatcttatgtttctctactcgtggtaaaacgtaccgt
ctgaaagtataccaattgcctctagcaagtcgtactgctcgtggtaagcctatcgttaac
attcttcctctagaagaaggtgaacgtattacggcaattctacctgtgtctgaattcagt
gctgataagtttatcttcatggctactggtgacggtacggttaagaagacacctctgaac
cagttcgctaacgtacgttcaaacggtttgatcgcagtgaacctacgtgatgatgactct
ttgattggcgtagatattacggatggtcaaagcgacattatgctgttctcgaaagcaggt
aaagttgttcgctttagcgaagataaagtacgtgctatgggtcgtactgcggcgggtgtt
cgcggtatgagactggctgacgaagaccaagtagtgtcgttgattgttccttcaaatgaa
ggtgacatcctaacagtgacgcaaaatggttacggtaaacgtacagaacttgctgagtac
ccaaccaaaggtcgtgcaacgcaaggtgttgtttctatcaaagtttctgaacgtaatggc
cctgtagtcggtgctgttcaagttgaggaaggcgatgagatgatgatgatcactgacgca
ggtacgctggttcgtacacgcgtggcggaagtaagccaagttggccgaaatacccaaggt
gtgactctgatccgtactgcagctgatgaaaacgtagttggtctgcaacgcattgatgag
attgacgaagttgaattgcttgagggcgaagaaggtgaagttgtagaagcaacagcatcg
gaagaagcaccgcaagtgacgaacactgaattaaacgattcagcggaagatgacgctgca
gaagatgattctgaagcgtaa
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