Vibrio scophthalmi: VSVS12_01839
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Entry
VSVS12_01839 CDS
T04650
Name
(GenBank) Cyclic di-GMP phosphodiesterase PdeB
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VSVS12_01839
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VSVS12_01839
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GFIT
Motif
Pfam:
EAL
Motif
Other DBs
NCBI-ProteinID:
ANS85605
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All DBs
Position
1:complement(2035666..2037867)
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AA seq
733 aa
AA seq
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MNITFPKDPLFKNIQLSSGIAFFVLVGFFLSSFFVIIRDSYQAISFVSAVMVVSFIRYEW
RALPGVILACIVYYSITGRNWESVVLLSSITPIMPFLASKLFNHLVGDMIEKSVFYVLKT
YFILIGIGLPLLSTVTLLALTYLIKIPPVSSGFLIYSILGTYLTHLLVTPLLYIALNACV
SDGNTALAKLDANLRTSTNRDIGYLSWLLVCLAIIATALTHQDSFVLNALCFFLLVVVVS
GFGRHGLVRPLLIGAIAILTITHDEIYRVNYLYESSIHLSELLIIVSVITTLAYLLGSQS
IKHYEMAQKQISFERIDPYTGLYNIAQLKEDLDAKKELVLIYLDITPTISHVSDLDQEGK
SQLIRQLHEFLCNKIGDLEHCYRPPFTTGILGYTVRHSALDKDLNRVANYLKKFQFYWQG
TSISLMSPTLYCTHIHPDKDVERTVSALCEQRPSYGRSVHWVDVHSSPAAGLDKLSYIQQ
LFKNDRFELNCQPYANLADPNSNALSFEVLLRIRNLDGTIVSPADFFPLINLFGFEVELD
RWVVEHTFQLLNENVEDWHRIDKCSINLTAKTLGVDSLADEILSKARRYHIPLSCICFEI
TESSALQNEQQAIETLTQLRQAGCKIALDDFGTGYASFAYLRTLPLDVLKIDGAFIKDLP
HNETDCLIVSSICSVTNDMQLETVAEFAESEDHIEILKGLGITYAQGYAVAKPRPLKSFL
KTISEVKESSLSI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcactttcccaaaagaccctttatttaaaaatattcaattgtcttcagggata
gccttttttgtactggttgggttctttctatcctcgttttttgtcattattcgcgactca
taccaagccatttcttttgttagtgcggtcatggttgttagtttcattcgttatgaatgg
cgagcattacctggcgtcattctggcatgcattgtctattactctatcactggacgtaat
tgggagagtgttgtgctcctctcgtcgattacaccgataatgccgttcttagcttcaaaa
ctgttcaatcacctcgtcggtgatatgatcgaaaaatcagtattttacgttttaaagacg
tactttattttgattggtattggattgccgctgttaagcacagttaccttgctagccctt
acgtatttgatcaaaatcccacccgtcagctcggggtttctcatctactcgatactgggt
acttatctgacgcatttacttgttacacctttgctttacattgctctaaatgcttgtgta
agcgacggaaataccgctcttgcaaaactcgatgcaaatctgcgtacttcgacgaatcgt
gatattgggtacttatcttggctattagtctgtttagcgattatcgcgacagcattgaca
catcaggattcgttcgttcttaatgctctctgtttttttctgttggttgtcgtggtgtca
ggatttgggcgacatggtttagtgcgccctctacttatcggtgctatcgctatattgacg
attacccatgatgagatttatcgagtcaattatctctacgagtcatcaatacatctatct
gagctgctgattattgtttcggtcatcacgacactggcttatttgctgggtagtcaatcg
attaagcactatgaaatggcgcaaaagcaaatttcttttgagcgtattgacccttacacc
gggctgtacaacattgctcaattgaaagaagatcttgacgctaaaaaagaactggttctg
atttatctcgacattaccccaacgatcagtcatgtttcagacttggatcaagaagggaag
tcgcagctcattcgtcagctgcatgagtttctttgtaataaaataggtgatctggaacat
tgttatcgtccgcctttcacgacggggattttgggctataccgtaagacatagtgcattg
gataaggacttgaatcgagttgcaaattacttgaaaaagtttcagttttattggcaaggg
acatcaatatctttaatgagtccaactttgtattgcacccatatccatccggataaagat
gttgagagaacggtttctgcgctgtgtgaacaaagacctagctatggacgctctgtgcat
tgggtagatgtgcattcttcaccggctgcaggccttgataagctgagttatatccagcaa
ttatttaaaaatgataggtttgagcttaattgtcagccctacgcaaatttggccgatcca
aacagtaacgcgcttagttttgaagtgctacttcgcattagaaacctcgatggtacgatt
gtctcgcccgccgacttttttccattaatcaacctattcggatttgaggtagagttggat
cgatgggtcgttgaacacacttttcaattgcttaacgaaaatgtcgaagactggcatcgt
atagataaatgctctattaatctgacggcgaaaacgctcggagtagactctttagcggat
gaaattttgagcaaagctcgacgttatcatattcctttgtcgtgcatttgttttgaaatc
acagagtcctcggcactgcaaaatgagcagcaagccatagagacactgactcagttacgg
caagcgggctgtaagattgcgctggatgactttggtaccggttacgccagttttgcctac
ctaagaacgttacctcttgacgtgctgaaaatcgatggtgctttcattaaggaccttccg
cacaatgagactgattgcttgatcgtaagctccatttgcagtgtcacaaatgatatgcaa
ttagagacggtggctgagtttgccgaaagtgaagaccatatcgaaatattaaaagggctc
ggtattacctacgcacaaggctatgcggtggcgaaaccacgtccacttaaatcatttctc
aagacaatcagcgaggttaaagagagcagcctcagtatttaa
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