Vibrio scophthalmi: VSVS12_01849
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Entry
VSVS12_01849 CDS
T04650
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsc03009
]
VSVS12_01849
Enzymes [BR:
vsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
VSVS12_01849
Ribosome biogenesis [BR:
vsc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VSVS12_01849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S-Me-THD_C
Motif
Other DBs
NCBI-ProteinID:
ANS85615
LinkDB
All DBs
Position
1:complement(2046752..2047483)
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AA seq
243 aa
AA seq
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MAQNKVQQEKARLDKFLCDTLDVTRREATILVKRGEVTIDGEICKITSVKVTNENVVMWQ
DRELKMRGPRYIMLFKPDGFVCSHDEGAHPTALALIDDIKKEDLHFAGRLDVDTTGLVLV
TDDGQWSHRITAPKHKCEKTYRVLLADAIGDDYAEKLAQGIELRNEKGLTAPAKLEIVDA
ANNEVLLTITEGKYHQVKRMFAALGNKVDELHRERIGSIVLDENLEPGEYRDLTQEEIDS
IWK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaataaagtgcagcaagaaaaagcacgtttagacaaatttttatgcgacacg
ttggacgtgacacgccgtgaagcgacgattctagtgaaacgtggcgaagtaacgattgat
ggtgagatttgtaagatcacatcagtaaaagtgaccaatgagaacgtggttatgtggcaa
gatcgcgagcttaaaatgcgcggccctcgctatatcatgctattcaagccggatggcttt
gtatgttcacatgacgaaggcgctcatccaacggcactggctttgatcgacgacattaaa
aaagaagatttgcattttgctggtcgtttggatgtggataccacaggtttagttttggtg
acggatgatggccaatggtcacaccgcattaccgcaccgaagcacaaatgtgaaaaaacc
tatcgcgtactgcttgctgatgcgattggcgatgattatgcagaaaaactggcgcaaggc
attgagcttcgtaatgagaaaggcctaacggcaccagcgaaacttgagattgttgacgcg
gcaaacaatgaagtgttgctgaccatcactgaaggtaaataccaccaagtgaagcgtatg
tttgcagcattaggtaacaaggttgatgaactgcaccgcgaacgtattggcagcatcgta
ctagatgagaatctagaaccgggtgaataccgcgatttaacccaagaagaaattgattct
atttggaaataa
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