Vibrio scophthalmi: VSVS12_01850
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Entry
VSVS12_01850 CDS
T04650
Name
(GenBank) uncharacterized protein
KO
K19789
DNA repair protein RadD
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_01850
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VSVS12_01850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DUF7577
DZR
zf-tcix
AAA
Zn_ribbon_3
T1R_D3-like
AAA_16
ERCC3_RAD25_C
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ANS85616
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Position
1:2047557..2049299
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AA seq
580 aa
AA seq
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MYTLRPYQADSVKAVIHYFRKHTTPAVIVLPTGAGKSLVIAELARLAKGRVLVMAHVKEL
VEQNHAKYEGYDLKGAVFSAGLGRKETDQQVVFASVQSVVRNLDEFKDQFSLLVIDECHR
VPEEKTSSYQKVISHLRELNPGMKVLGLTATPYRLGVGWIYQYHTRGQVRSEEPRFFRDC
IFELPIRYLLDEEFLTPAKMMDAPVLSYDFSQLKPASTGRYKEAEMDMVIDQAKRATPQI
VQQIIQFSADKQGIMIFAATVRHAQEIFGLLPQEQTAIVIGDTPTPERDAIIQRFKQREI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTECLVLDYAGNSY
DLYQPEVGNPKPDSDSEIITIPCPACGFNNNFWGKLDNNGFLIEHFGRRCQGYFEDDDTG
EREHCGYRFRAKYCSECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVYECLEMD
FNLFKDDKGKNQLKVTYRGENQAAVHEFWSLNTPKQKQTFLAQFVRPHLADKHRPFTESS
PSKVIANQHRFRPPQFVIARKVGRFWKMRDKIFADELTDG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtacaccctgcgcccctatcaagccgactcagtaaaagcggtcatccattactttcgt
aaacacaccactccagccgtcattgtgctgccaaccggagcgggtaaaagcttagtcatt
gccgagctggcgcgccttgccaaaggccgcgtattggtgatggcacatgtaaaagaactg
gttgaacaaaaccatgccaaatacgaaggttacgatctcaaaggcgcggtgttctccgcc
ggtttaggccgtaaagagaccgatcaacaagtggtttttgcatcggtacaatccgtagtg
cgtaatctggatgaatttaaagaccaattttcactgttggtgattgatgaatgtcaccgt
gtaccggaagaaaaaacctccagctatcaaaaagtgatctctcatctgcgagagctaaat
cccgggatgaaagtgcttggtttaacggcgacgccgtaccgcttaggcgtcggctggatc
tatcaatatcacactcgtggtcaagtacgcagtgaagaaccccgcttcttccgtgattgc
attttcgagttgcccattcgttacttgctggatgaagaattcctcacgcccgcgaaaatg
atggatgcgcccgttttaagctacgacttttcacagttaaaacccgctagcacggggcgc
tataaagaagcggaaatggacatggttattgaccaagctaagcgtgccacaccgcagata
gtccaacaaatcatacaattctcagcagataaacaaggcatcatgatcttcgcggcaacg
gtgcgtcacgcacaagaaatcttcggtttattgccacaagaacaaaccgcgattgtgatt
ggtgacacccccacgccagagcgcgatgcgattattcaacgctttaagcagcgtgagata
aaattcttagtcaacgtgtcggtattaaccactggctttgatgcgccgcatgttgatctg
attgctatcttacgcccgaccgaatctgttagtttgtatcaacaaattgttggccgaggt
ttgcgtttgtcaccgggaaaaacggaatgcttggtgcttgactacgccggtaacagctac
gatttgtatcagcctgaggtgggcaatcctaaaccagattccgacagtgaaatcatcacc
attccctgccctgcctgtggttttaataacaacttttggggcaagttggataacaacggc
tttttaattgagcattttggccgccgttgccaaggctattttgaagacgacgacactgga
gagcgtgagcattgcgggtaccgcttccgcgccaaatattgcagcgaatgtggcgcagac
aatgatatcgccgcgcgcatttgccacgagtgtgatgccaccttagttgacccagataaa
aagcttaaagaggcgctgaatctaaaagatgccttagtatacgaatgcctggaaatggac
tttaatctatttaaagatgacaaaggtaagaatcaacttaaagtgacctaccgtggtgaa
aaccaagctgcggtgcacgaattttggtcactcaatacgccgaagcagaaacagacattt
ttagcgcagtttgttcgccctcatctcgcggataaacatcgcccctttaccgaatcatca
ccaagcaaagtgatcgccaatcagcaccgtttccgcccgccacagttcgtgattgcgcgt
aaagtgggacgtttttggaaaatgcgcgataaaatctttgccgatgaactcactgacggt
taa
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