Vibrio scophthalmi: VSVS12_01927
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Entry
VSVS12_01927 CDS
T04650
Name
(GenBank) ATP-binding/permease protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vsc
Vibrio scophthalmi
Pathway
vsc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VSVS12_01927
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_01927
Transporters [BR:
vsc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VSVS12_01927
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
AAA_23
nSTAND1
AAA_22
AAA_16
AAA
MMR_HSR1
TsaE
Motif
Other DBs
NCBI-ProteinID:
ANS85693
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All DBs
Position
1:2126568..2128355
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AA seq
595 aa
AA seq
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MDKKKQRGLNKWLREQSKLAKRWLLLAVGLGVLSSALLLGQAALLASILHQLIIEQVDKS
ALIGQFVTLAITIALRALCSWGREIAGYRCGEQIRIYIRQLILDKLRELGPAYIKGKPAG
SWATLLLEQVEEMHDFFARYLPQMSLAVMVPFIILVVVFPVNWAAGVIFLLTAPLVPLFM
ALVGIKAADAGQKNFKALQRLSGHFYDRLQSMTTIRLFDRTKAETELMQGASEVFRSRTM
EVLRIAFLSSAVLEFFTSISIALTAVYFGFAFIGELNFGGYGAAVTLFAGMFVLILAPEF
YQPLRDLGTFYHAKQQAVAAAESIVEFLDTDVTAVKSGDKPLQNPNDITIKATNLEVFSL
EGKKLLGPITFELRPQQTTALVGPSGAGKTSLVNAILGFLPYQGSLTINGIERTELNLAD
WRKHISWVGQNPLLVHGTIRDNITLGKDDLSEAVIKQALQDSFAAEFVDLHGLDYPVSDR
SGGLSVGQAQRLALARAMLQNGQFWLLDEPTASLDARSEHLVTQGLNNQIQERSALIVTH
QLAPLQNVEQILVMQDGQIVQAGTFEQLSQTDGLFQQMLSANQAMQHSNEGNLDA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaacaacgcggcttgaacaagtggcttcgagagcaaagtaaactggct
aagcgctggctactccttgctgtcggtttaggcgtactttcaagtgctctccttttgggg
caagcagcattgctcgcttccatccttcatcaattgatcatcgaacaagtcgataagtca
gcgcttattggccagtttgtcacattagcgattaccatcgcgttgcgtgccctatgctca
tggggacgtgaaattgctggttaccgctgtggtgaacaaattcgtatctacattcgccag
ttgattctcgacaaactgcgcgaactcggccctgcttacatcaaaggtaagcccgcaggc
tcttgggcaaccctcctgcttgagcaagtggaagaaatgcacgatttcttcgctcgctat
ctgccgcagatgtctttagctgtcatggtgccttttattattctcgtggtcgtcttccca
gttaactgggctgccggggtaatcttcttactcaccgcaccattagttccgctatttatg
gctttagtcggcattaaagcggccgatgcgggacaaaaaaactttaaggccttgcaacgt
ctctcaggtcatttctacgatcgtctacagtcgatgaccaccattcgcttatttgaccgc
accaaagcagaaacagaattgatgcaaggcgcttccgaagtgttccgctcacgcacaatg
gaagtattacgtattgcctttctctcttctgcagtattggaattctttacgtcgatctcg
attgccttgaccgcggtttactttggttttgccttcattggtgaacttaactttggtggt
tatggcgcggccgtgactctgtttgccggtatgtttgtcttgatccttgcccctgaattt
tatcaaccgcttcgcgatctcggcaccttctatcacgccaagcagcaagccgtcgccgct
gcagaaagtatcgtagaatttctagatactgatgttactgcagtaaagtcaggcgataag
ccactgcaaaatccaaacgacatcaccatcaaagcaactaatttagaagtgtttagctta
gagggtaagaaactgctcggccctattacgtttgaattgcgtccacaacaaaccaccgct
ctcgtgggtccaagtggcgcgggtaaaaccagcttagtgaatgcgattttaggcttttta
ccttaccaaggatctttaaccattaatgggattgaacgtaccgagctgaacctagccgat
tggcgcaaacatattagttgggttggacaaaacccattgttggtgcacggcacgattcgt
gacaacatcacgctaggtaaagatgaccttagcgaagcagtcatcaagcaagcgttgcaa
gactcgtttgccgctgaatttgttgacctacatggccttgattatccggtctctgatcgt
tctggcggactttccgttggtcaagcgcagcgtttagcactggctcgagccatgctgcaa
aatggccagttctggctattagatgaaccaactgccagccttgatgcgcgtagtgaacac
cttgttacccaaggtctcaataaccaaatccaagagcgaagtgcacttatcgtgacgcac
caactggcccctctgcaaaacgtggaacaaattctggttatgcaagacggccaaatcgtt
caagccggaacgtttgaacagctctctcaaaccgatggcttattccaacaaatgttatct
gccaatcaagccatgcaacacagcaacgaggggaacttagatgcgtga
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