Vibrio scophthalmi: VSVS12_02172
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Entry
VSVS12_02172 CDS
T04650
Symbol
darS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSVS12_02172 (darS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsc01007
]
VSVS12_02172 (darS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_02172 (darS)
03029 Mitochondrial biogenesis [BR:
vsc03029
]
VSVS12_02172 (darS)
Enzymes [BR:
vsc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
VSVS12_02172 (darS)
Amino acid related enzymes [BR:
vsc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VSVS12_02172 (darS)
Transfer RNA biogenesis [BR:
vsc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VSVS12_02172 (darS)
Prokaryotic type
Other AARSs
VSVS12_02172 (darS)
Mitochondrial biogenesis [BR:
vsc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
VSVS12_02172 (darS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Raffinose_syn
Motif
Other DBs
NCBI-ProteinID:
ANS85933
LinkDB
All DBs
Position
1:complement(2383255..2385033)
Genome browser
AA seq
592 aa
AA seq
DB search
MRTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYKVA
EQLRNEFCIKLTGEVRARPESQINAGMATGEVEILASGLEIINRSDVLPLDFNQKNSEEQ
RLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMS
AEQVREKTEAMIRQMWQELLNVDLGEFPIMSFEEAARRFGSDKPDLRNPLELVDVADILK
DVDFKVFSGPANDEKGRVAVIRVPGGAALSRKQIDEYTNFVGIYGAKGLAWMKVNDRAAG
FEGVQSPVAKFLNEEVVAQILERTQAETGDIILFGADSKRVVTEAMGALRLKLGTDLELT
DKAAWKPLWVIDFPMFEEDDEGNLHAMHHPFTSPLGLTAEELIANPASANSNAYDMVING
YEVGGGSVRIHNAEMQSAVFSILGIEADEQKAKFGFLLDALKFGTPPHAGLAFGLDRLVM
LLCGTDNIRDVIAFPKTTAAACLLTNAPSVANPASLDELAIAVTAAKEKAAE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccattactgtggtcacctgaacaagtcccttgcaggacaaactgtagaactt
tgcggctgggttaaccgtcgccgtgatttaggcggtcttatttttatcgatatgcgcgac
cgcgaaggtatcgttcaggtagtagttgatccagacatggctgatgcttataaagtcgca
gagcaactacgtaatgaattctgtatcaaactgacgggtgaagtacgtgcacgtcctgag
agccaaatcaatgctggtatggcaacaggcgaagtggaaatccttgcttcaggccttgaa
atcatcaaccgtagtgatgtgcttcctctagacttcaaccaaaagaactctgaagagcaa
cgtctaaaataccgttacctagacctacgtcgtccagagatgagcgaccgcatcaaacta
cgtgcaaaagcatcaagcttcgtacgtcgtttcctagatgagaatggtttcctagatatc
gaaacaccagtactaacgaaagcaacaccagaaggtgcgcgtgactacctagtaccaagc
cgtgtacacaaaggcagcttctacgcactacctcaatcacctcagctatttaaacagctg
ctgatgatgtctggttttgaccgttactaccaaatcgttaaatgtttccgcgatgaagat
ctacgtgctgaccgtcagcctgaatttactcagatcgatatcgaaacgtctttcatgtct
gctgagcaagtacgtgaaaaaacagaagcgatgattcgtcaaatgtggcaagagctgctc
aatgttgatctgggtgaattcccaatcatgtcatttgaagaagcggcgcgtcgttttggt
tcagacaaaccagatctacgtaacccacttgagcttgtagacgtggcagacatcctgaaa
gatgttgatttcaaagtgttctctggccctgcaaacgacgaaaaaggccgcgtagcggta
attcgcgttcctggtggtgctgcactgtctcgtaagcaaatcgacgaatacactaacttc
gttggtatctacggcgcgaaaggcctagcatggatgaaagtgaatgatcgtgctgctggc
ttcgaaggcgtacaatcgccagtggctaagttcctaaacgaagaagtggttgctcaaatc
ctagagcgtactcaagcagaaacaggcgacatcatcctattcggcgcagacagcaaacgt
gttgtgactgaagcgatgggcgcactacgtctgaagctgggtactgaccttgagcttact
gataaagcagcatggaaaccgctatgggttatcgacttcccaatgtttgaagaagatgac
gaaggcaacctacatgcaatgcaccacccattcacttctcctctaggcttaacagctgaa
gagctaatcgcaaacccagcgtcagcaaactcaaatgcttacgacatggttattaacggt
tacgaagttggtggtggttcagtacgtatccacaacgcagaaatgcaatcagcagtattt
agcattctaggtattgaagcggacgagcaaaaagcgaagtttggtttcctacttgatgct
ctaaaattcggtacgccaccacacgcaggtcttgcattcggtttagaccgtctagtgatg
ctgctatgtggtactgataacatccgtgatgttatcgcgttccctaaaacaacagcggcg
gcgtgtctactgactaacgcaccaagcgtagcaaacccagcatctctagatgagcttgcg
attgcggtgacggctgcgaaagagaaagcagcggaataa
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