Vibrio scophthalmi: VSVS12_02350
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Entry
VSVS12_02350 CDS
T04650
Symbol
xseB
Name
(GenBank) Exodeoxyribonuclease VII
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VSVS12_02350 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_02350 (xseB)
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VSVS12_02350 (xseB)
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VSVS12_02350 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Vps53_N
TACC_C
Motif
Other DBs
NCBI-ProteinID:
ANS86111
UniProt:
A0A1B1NR40
LinkDB
All DBs
Position
1:2577522..2577764
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AA seq
80 aa
AA seq
DB search
MASKKPENMTFEATIDELDTIVEDLENGDLALDDALKKFERGISLARAGQSKLNDAEQRV
SILLQNDDDAPLSDFSSQPE
NT seq
243 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaagaaacctgaaaatatgacctttgaggcgaccattgacgagttagatacc
atcgttgaagacttagaaaatggagatttagcgctggatgatgcgctgaagaaatttgag
cgtggcatctctttagctcgtgcaggccaaagcaaactgaatgacgccgaacagcgcgtt
agcatcttattgcaaaatgacgatgacgcaccgttatctgatttttcctctcagcctgaa
taa
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