Vibrio scophthalmi: VSVS12_02524
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Entry
VSVS12_02524 CDS
T04650
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00061
Fatty acid biosynthesis
vsc00071
Fatty acid degradation
vsc01100
Metabolic pathways
vsc01212
Fatty acid metabolism
vsc02024
Quorum sensing
vsc04146
Peroxisome
Module
vsc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VSVS12_02524
00071 Fatty acid degradation
VSVS12_02524
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
VSVS12_02524
09145 Cellular community - prokaryotes
02024 Quorum sensing
VSVS12_02524
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vsc01004
]
VSVS12_02524
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vsc04147
]
VSVS12_02524
Enzymes [BR:
vsc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
VSVS12_02524
Lipid biosynthesis proteins [BR:
vsc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
VSVS12_02524
Exosome [BR:
vsc04147
]
Exosomal proteins
Exosomal proteins of breast milk
VSVS12_02524
Exosomal proteins of breast cancer cells
VSVS12_02524
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ANS86280
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All DBs
Position
1:2770655..2772340
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AA seq
561 aa
AA seq
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MIQPDQLSNTNCTLPPASDMILKWAQERPDEIYLKQIINRQFVEYSYADVADKALKLVSA
LNELGIRPGERVALVSKNCAEWFICDLAMMLGDFVSVPIFPTAGADTIEYCLTHSESKVL
IGGKLDDPAATQQVIDAMPELITISLAYDTAPRCQHQFTSLIEQSEPTEARPQHHDDKLM
SIVYTSGTSGLPKGAMLTYGAFAWSVQQLINHIQIERGDRLFSYLPLAHITERVYIFGSS
IMGGVETAFPESLDTFIDDVKMQRPTLFISVPRLWTLFQQRIQDKLPQKKLNLLLKIPFV
NTLIKKKLADGLGLDQARVLGCGSAPVSPALLDWYHRVGLNITEAWGMTESFAYSTLNFP
FRADKIGSVGNAGPGIELKIADDEEIMVRGQGLFSGYYKNDIATQESFDRDGWLHTGDIG
SIDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYTRVEMMCLIGLGLPGPILLVVP
HDFPNFDPQRYERSTQKVIERMNTKLASHEKIKGVLMIKEPWSIENGVLTPTLKIKRHIL
EKKYHDVGANWPKDQLVVWEK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgattcagccagaccaattgagcaatacaaattgcacgcttccccctgccagtgacatg
attcttaaatgggctcaagaacgcccagatgaaatttatctcaaacagatcattaatcgc
caatttgtcgaatacagttacgctgatgtcgccgacaaagcattgaagttagtcagtgct
ctcaacgagctagggattcggcccggcgagcgagtggcactcgtatcaaaaaattgtgcc
gagtggtttatttgtgatttagccatgatgttaggcgattttgtcagtgtgcctattttt
ccaaccgccggcgctgataccatcgaatactgtctcactcacagtgagagcaaagtactg
attggcggaaaactggatgatccagccgccactcagcaagtgattgatgctatgcctgag
ctaatcaccatcagtcttgcttatgacaccgcaccacgctgccagcatcaattcacctca
ttaattgaacagtcagagccaactgaagcaaggcctcagcatcatgacgataaactgatg
tcgattgtctacacttcaggaacatcgggattgcctaaaggggcaatgctgacctacggc
gcgtttgcttggtctgttcagcagttgattaatcacattcaaatcgaacgaggcgatcga
ctgttttcttatttacctttggcacacatcactgagcgagtctatatttttggctcttca
attatgggtggtgtcgaaaccgcatttcctgaatcactggatacctttatcgatgatgtg
aaaatgcagcggccaaccttattcatttccgtgccgcgactgtggacgttattccaacaa
cgaatccaagataaattgccgcaaaagaaactcaatcttctgctgaaaatcccgtttgtg
aatacgctgattaagaaaaaattggccgacggtttgggattagatcaagcccgagtttta
gggtgtggatctgccccagtctctcctgcactgcttgattggtatcaccgtgttggtctg
aatattactgaagcatgggggatgaccgaatccttcgcttacagcacgctgaacttccca
tttcgcgctgataaaattggcagtgtggggaatgcagggccggggatcgagctgaaaatc
gctgacgatgaagagatcatggtacgcggtcagggcttattttcgggttactacaaaaat
gatattgccactcaagaatcctttgatcgtgacggctggttgcacacaggcgatataggc
tcaatcgatagtgagggttacctcaccattcaaggccgtaaaaaagataccttcaaaact
gccaaaggcaaatttgttgcacccgtgccgatcgagaaaaaactctttgaatacactcgt
gttgagatgatgtgtttgattggccttggtctgccaggacctatattgttggtcgtgcca
catgacttccccaactttgatccgcagcgttatgagcgtagtacacaaaaagtgattgag
cgtatgaataccaaattggcctcccacgagaagatcaaaggagtgttgatgatcaaagag
ccttggagcatcgaaaatggcgtcctaacaccaacgcttaaaattaaacgacatattctg
gagaaaaaatatcacgatgtcggagcaaactggccaaaagaccaacttgtcgtctgggaa
aaataa
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