Vibrio scophthalmi: VSVS12_02527
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Entry
VSVS12_02527 CDS
T04650
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_02527
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VSVS12_02527
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
Rad51
GvpD_P-loop
SLFN-g3_helicase
AAA_22
ABC_tran
AAA
RecA_N
AAA_16
AAA_29
AAA_14
nSTAND_NTPase5
NTPase_1
Zn_ribbon_Thio2
AAA_24
Zeta_toxin
Viral_helicase1
AAA_5
nSTAND3
Zn_ribbon_8
PAXNEB
DZR
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ANS86283
UniProt:
A0A1B1NRJ0
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Position
1:complement(2776198..2777577)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCSACGAWNTISEVRLAASPAVARNERLTGYAGSGDES
QVQTLAEINLQEVPRFSSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSA
QMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDRICQVAEKEQPRIMVIDSIQV
MHVADVQSSPGTVAQVRESATALTRYAKQNNVAVFMVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDTRFRTLRSHKNRFGAVNELGVFAMTGQGLREVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLGNPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKRAIVPAANMPKGGIEGMQIHGVKKLSEAIQAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaacgagcatacgtttgtaatgattgcggggcagattttcctcgctgg
caaggtcaatgcagtgcctgtggcgcttggaataccatcagtgaagtgcgccttgctgca
tcacctgcagttgcacgtaatgaacgattgaccggttatgctggttctggcgatgaaagc
caagtgcaaaccttggcggaaattaatctgcaagaggtgcctcgttttagcagtggcttt
aaagagctcgaccgagtgctcggtggcggtatcgtacctggtgcggcgattttgattggt
ggtaatcctggggcgggtaaatcaacattactgctgcaaaccatgtgtcttttgtccgca
caaatgcccaccttgtatgtcacgggtgaagaatcattgcagcaagtggccatgcgcgcc
tcacgtctaggtttgccaaaagagcatctaaaaatgctctcagaaaccaatgtcgatcgt
atttgccaagtggctgagaaagagcagccaagaattatggtgatcgattcgatccaagta
atgcacgttgccgatgtgcaatcatcaccaggtacggttgcgcaggtgcgtgagtcggcc
acggcactgacgcgttatgctaagcaaaacaatgtcgccgtgtttatggttggacatgtc
accaaagatggcacactggcaggcccgaaagtccttgagcatattattgactgctcggta
ttgctggatggtggcaccgatacccgttttcgtaccttacgcagccataaaaaccgtttc
ggtgcggtgaatgagttgggcgtatttgctatgacggggcaaggcttacgtgaagtcagt
aatccgtcggcgattttcctttctcgcggtgaagaagaaacctctggcagttccgtgatg
gtggtttgggaagggacgcgtccactcttggttgaaattcaagctttagttgattactcg
caattgggtaaccctcgtcgtgttgccgtgggtttagagcaaaaccgtttatcgttgctg
ctggctgtattacacaagcatggtggactgcagatggcggaccaagatgtattcgttaat
gtcgttggtggtgtgaaggtgaccgaaaccagtgctgatcttgctttggttatggcattg
ttgtcgagctttagagatcgtccactaccaaaagatgtcgtggtgtttggtgaagtcggc
ttagcgggagaaattcgtcctgtgccaagtggccaagaacgtctcaatgaagcatttaaa
cacggttttaaacgcgcgatagttcccgcggccaatatgcctaaaggcggtattgaaggc
atgcagatccacggagttaaaaaactttcagaggcaattcaggcgttcgacgagctttga
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