Vibrio scophthalmi: VSVS12_02544
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Entry
VSVS12_02544 CDS
T04650
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VSVS12_02544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_02544
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VSVS12_02544
DNA repair and recombination proteins [BR:
vsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VSVS12_02544
Prokaryotic type
VSVS12_02544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANS86300
LinkDB
All DBs
Position
1:complement(2794682..2795365)
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AA seq
227 aa
AA seq
DB search
MAKLLTWDDVIGDEQQQPYFQQTLSYVAEQRAEGKVVFPPETDVFNAFDATLFANVKVVV
LGQDPYHGPDQAHGLCFSVLPGVKTPPSLVNMYKELAQDVEGFTIPQHGYLQSWAEQGVL
LLNTVLTVEQGKAHSHAKTTGWETYTDKVISALDQYGSGIVFLLWGAHAQKKGRFIDRSK
HHVLEAPHPSPLSAHRGFFGCHHFSLANQHLTEQGLKPIDWRLPERV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttattgacttgggatgatgtgatcggcgacgagcagcagcaaccttatttt
cagcaaacactgagttatgtcgcagagcagcgcgcagagggtaaggtggtttttcctcct
gaaactgatgtttttaacgcctttgatgccacgctatttgccaacgtaaaagtggttgtt
ttaggccaagatccttaccacggaccagatcaagcacatggcttatgcttctctgttcta
cctggagtaaaaacccccccttctttagtcaatatgtacaaagagctcgcgcaagatgtg
gaggggtttactattccacagcatggctatttgcaatcttgggctgaacaaggggtgcta
ttactcaataccgtgttaacggtggagcagggcaaagcgcactctcatgcaaaaacaacc
ggatgggaaacttataccgataaagtgatttcagcacttgaccaatatggcagtggcatt
gtgtttctactctggggagcgcatgcgcagaaaaaaggacgctttattgatcgctcaaag
caccatgtactagaagctccgcacccatcaccgctgtcggctcaccgtggtttctttggt
tgccatcacttttctttggctaaccagcacttaaccgaacaaggcctgaagccgattgat
tggagactgcctgagcgggtttaa
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