Vibrio scophthalmi: VSVS12_02563
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Entry
VSVS12_02563 CDS
T04650
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00470
D-Amino acid metabolism
vsc00550
Peptidoglycan biosynthesis
vsc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VSVS12_02563 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VSVS12_02563 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
VSVS12_02563 (murD)
Enzymes [BR:
vsc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VSVS12_02563 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
Precursor biosynthesis
Amino acid ligase
VSVS12_02563 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
DAO
NAD_binding_9
Pyr_redox_2
Thi4
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
ANS86319
LinkDB
All DBs
Position
1:complement(2819237..2820559)
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AA seq
440 aa
AA seq
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MTMQDWQGIEKVVVVGLGITGLSVVKHLKRLPLDLQVKVIDTRATPPGQESLPEDVELHT
GGWRTNWLLEADLVVTNPGIALATPEIQQVIAAGIPVVGDIELFAWHVDKPVIAITGSNG
KSTVTDMTGVVAKAAGWNVGVGGNIGVPALDLFEQPADLYVLELSSFQLETTSSLPLVAA
AFLNLSEDHMDRYQGMADYRLAKLRIFDHAQVCVVNADDKATYPDDEKSLLEFSLEQSSD
ACVIEHDGVEFLAYKGETILAVNELSLVGRHNVANSLVVIALLSAAGVDVKAGLAAMKSY
NGLTHRCQVVADNRGIKWVNDSKATNVASTLAALSGLNLAGKLYLLVGGNGKGADFSDLA
PVLAQLNVQLCCFGADGDQFVPLHASALRFATMQEIVEWATPQLQAGDMVMLSPACASFD
QFSNFMARGDAFAELAEQFA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcaagattggcaaggtatcgaaaaagttgtggttgtggggctcggtattacc
gggctctctgtcgttaagcatctcaagcgtttaccgctagatttgcaggtgaaagtgatt
gatacgcgtgcaacgccgcctggtcaagaatcactgcctgaagatgttgagttgcatacc
ggcggttggcgcaccaattggctattagaggccgatttagtggtgactaacccggggatt
gcgttagcgactcctgagatccaacaagtgatcgccgcaggtattcctgttgttggtgat
atcgagctgtttgcatggcacgtcgataagcctgtgattgccattaccggttctaacggt
aagagtacggtaaccgatatgactggcgtggtggcgaaagcagcaggctggaatgtaggt
gttggtggcaatattggtgtaccagcgcttgatctgtttgaacaaccggccgatctctat
gtgcttgagttatcaagtttccaactcgaaacaacctcaagcttacctttggtggccgct
gcctttttgaatctttctgaagatcatatggatcgctaccaaggtatggcagattaccgt
cttgcgaaactgcgtatttttgatcatgcccaagtgtgcgtggttaatgctgacgacaaa
gcgacttatcctgatgatgaaaaatcgctgcttgagttttcactagagcagtcaagtgat
gcttgcgtgatcgagcacgatggcgttgagtttttagcttataagggtgaaaccattctc
gcggtaaatgagttgagtttggttggtcgtcacaatgtggcgaatagcttagtcgtgatt
gcgctgctcagtgcggccggtgttgatgtgaaagctggccttgctgcaatgaagtcttac
aacggtctgacacatcgatgtcaggttgttgccgataatcgtggtatcaagtgggtcaat
gattccaaggcgaccaatgtggcgagtaccctcgcggcgctgtctggcctaaatttagcc
ggtaaattgtacttattggttggtggtaacggcaaaggtgcggattttagtgatttggca
cccgtactggcgcaactcaatgtgcaactgtgctgctttggcgcagatggcgatcaattt
gtgcctttgcatgcatctgctctgcgttttgctaccatgcaagagatcgttgagtgggca
accccacaactgcaagcgggcgatatggtgatgttatcacctgcgtgtgcaagctttgat
cagttcagtaactttatggcgcgtggcgatgcttttgccgagctcgccgagcagtttgct
taa
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