Vibrio scophthalmi: VSVS12_02597
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Entry
VSVS12_02597 CDS
T04650
Symbol
karS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSVS12_02597 (karS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsc01007
]
VSVS12_02597 (karS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_02597 (karS)
Enzymes [BR:
vsc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VSVS12_02597 (karS)
Amino acid related enzymes [BR:
vsc01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VSVS12_02597 (karS)
Transfer RNA biogenesis [BR:
vsc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VSVS12_02597 (karS)
Prokaryotic type
Other AARSs
VSVS12_02597 (karS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ANS86353
UniProt:
A0A1B1NRQ8
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All DBs
Position
1:complement(2854531..2856066)
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AA seq
511 aa
AA seq
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MTDVVQNESVQEASAQEENKLIAERRAKLDAIRKSCKANGHPNDFRRDALAGDLQAEFGE
KTKEELEELNHVVAIAGRVMAKRGPFLLLQETSGNIQAYADKAVQKVLKEQYHGLDIGDI
IGVKGALHKSGKGDLYVNMEEFELLTKALRPLPEKFHGLTDQEMRYRQRYVDLIVNEDSR
NAFKIRSKLVSAIRRFMESKRFMEVETPMMQVIPGGASARPFITHHNALDQQMFLRIAPE
LYLKRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMIEFYMAYADYKDLMDLTEEMLSTV
ALEILGATAMPYGDQMVEFGGQYARMTMLDAIKHYNPEHEAIQALTEEGVQDRDLMVSIA
KSLDIYVEKFWTCGQLLEEIFGETAEPQLIQPTFITGYPADISPLARRSDDNAFFTDRFE
FFIGGREVANGFSELNDAEDQDARFKSQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQ
GIGIDRLAMLFTNTHTIRDVILFPAMRPQAQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgttgttcaaaacgaatctgtacaagaagcttctgcacaagaagagaataag
ctaattgctgaacgccgcgcgaaactggatgctatccgtaagagctgcaaagcaaacggc
cacccaaatgactttcgtcgtgatgctctagcgggcgacctacaagctgaattcggtgaa
aagactaaggaagagctagaagagcttaaccacgtagtagcaatcgcgggtcgtgttatg
gcgaaacgtggtccattcctacttcttcaagaaacatcgggcaacattcaagcttacgca
gacaaagcagtacaaaaagtattgaaagagcaataccacggtcttgatatcggtgacatc
atcggtgtgaaaggtgctctacataagtctggtaaaggcgacctttacgtaaatatggaa
gagttcgaattgctgactaaagcacttcgtccattgccagagaaattccacggtctaaca
gaccaagagatgcgttaccgtcaacgttacgtagacctaatcgtgaatgaagattcacgt
aatgcatttaaaattcgttctaaactggtttctgcgattcgtcgcttcatggaatcaaaa
cgcttcatggaagttgaaactccaatgatgcaagtgatccctggcggtgcgtctgcgcgt
ccatttatcactcaccacaacgcactggatcaacaaatgttcctacgtatcgctcctgag
ctatacctgaagcgtctagtggttggtggttttgagcgtgtattcgaaatcaaccgtaac
ttccgtaacgaaggcctatctccacgtcataacccagaattcactatgatcgaattctac
atggcgtacgcagattacaaagatcttatggatctgactgaagagatgctaagtacagtt
gcgcttgaaattctaggtgcaacggcaatgccttacggtgaccaaatggttgagttcggt
ggtcaatacgcacgtatgactatgctagatgcgatcaagcactacaacccagaacacgag
gcaatccaagcgctaacagaagaaggcgttcaggatcgtgatttgatggtttcaatcgcg
aaatcgctcgatatctacgtagagaagttctggacttgtggtcaactactagaagaaatc
ttcggtgagacagcagaaccgcaacttatccaaccgacgttcatcactggctacccagcg
gatatttctccactggctcgtcgtagcgatgataacgcattctttactgaccgctttgag
ttcttcattggcggccgtgaagtggcaaacggcttctctgagctaaacgatgcagaagac
caagatgcgcgctttaagtctcaagttgatgcaaaagatgcgggtgatgatgaagcaatg
ttctacgatgcagattacattacggcactagagcacgggctaccaccaacagcgggtcaa
ggtatcggtatcgaccgtctagcgatgttattcaccaacacgcataccattcgcgatgtg
atcctattcccagcgatgcgcccacaagcgcagtaa
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