Vibrio scophthalmi: VSVS12_02882
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Entry
VSVS12_02882 CDS
T04650
Symbol
dnaB
Name
(GenBank) DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VSVS12_02882 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsc03032
]
VSVS12_02882 (dnaB)
Enzymes [BR:
vsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
VSVS12_02882 (dnaB)
DNA replication proteins [BR:
vsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VSVS12_02882 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
divDNAB
AAA_33
nSTAND3
CbiA
Motif
Other DBs
NCBI-ProteinID:
ANS86621
UniProt:
A0A1B1NSK9
LinkDB
All DBs
Position
1:complement(3136172..3137584)
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AA seq
470 aa
AA seq
DB search
MADTRSDNRKRKHPDAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVAERVMASDFYSR
PHRLVFEAVKRILEDSKPLDLITLSEHLEQHEQLEDVGGFAYLADLVKNTPSAANINAYA
DIVAERAMVRNLISVANEIADSGYDPQGRSSDDLLDLAESKVFAIAESRTTESEGPQNVD
NILEKTLERIELLYKSPQDGVTGVSTGFHDLNKKTAGLQGSDLIIVAARPSMGKTTFAMN
LCENAAMDQDKPVLIFSLEMPAEQLMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGI
LMQKKNMYIDDSSGLTPTELRSRARRIARDSGGLSMIMVDYLQLMRVPGMQDNRTLEISE
ISRSLKALAKELNVPVVALSQLNRSLEQRADKRPINSDLRESGAIEQDADLIMFIYRDEV
YNPDSSMKGTAEIILGKQRNGPIGSVRLTFQGQYSRFDNYAGPAFDMDDE
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacccgttcggataatcgcaaacgtaaacatcctgatgcacaagtggatgca
ataaaagtcccaccccattctctagaagcagagcaatccgttatcggtggcttgttgctc
gataatgagcgctgggatacggttgcagaacgagtcatggcgagcgacttttatagccgc
ccgcatcgcttggtttttgaagcggttaaacgcattcttgaagacagcaaacccctcgat
ctgatcaccttatcggagcatcttgaacagcatgaacagctggaagatgtcggtggcttt
gcctacttggccgatttggttaagaacacgccaagtgccgccaacatcaacgcctacgcg
gatatcgtggctgagcgcgcgatggtgcgtaacttgatcagtgtggcgaatgagattgcg
gattccggttacgatccgcaaggtcgttcgtctgatgacttgctggatcttgccgagagc
aaggtatttgccattgccgaatcccgcacgacggaaagtgaaggcccacagaacgtcgac
aatattcttgagaaaacgctggagcgtatcgagctattgtacaaatcgccacaagatggc
gtgacgggtgtcagtacgggtttccacgatctgaataagaaaacggcgggcctgcaaggc
tctgatttgatcatcgttgctgcgcgtccatcgatgggtaaaaccacctttgcgatgaac
ctgtgtgaaaacgccgcgatggatcaagacaaaccagtcttgattttttctctagagatg
ccagccgaacagttgatgatgcgtatgcttgcatcgctttctcgtgtggaccaaaccaaa
attcgtaccggccagttggatgatgaagactgggcgcgtatctcttcgaccatgggtatt
ctcatgcagaagaaaaatatgtacatcgatgacagctccggcttaacaccgacggaactg
cgctcgcgcgcacgccgtatcgctcgtgactcaggtggcttgagcatgatcatggtcgac
tatcttcagttgatgcgtgtgccagggatgcaagataaccgtaccctcgagatctcagag
atttcgcgctcactgaaagcgttagcaaaagagctaaacgtgccagtggtggcgctatcg
cagctaaaccgttccctagagcaacgtgccgataaacgaccgattaactcagacttgcgt
gaatcgggagcgatcgagcaggatgctgacttgatcatgtttatctaccgtgacgaagtg
tacaacccagatagctcaatgaagggcaccgcagaaatcatccttggtaaacagcgtaac
ggcccgattggttcggtgcgtttgactttccaagggcaatactctcgctttgataattac
gcgggtcctgcgtttgatatggatgacgagtaa
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