Vibrio scophthalmi: VSVS12_02935 Help Entry VSVS12_02935      CDS       T04650                                  Symbol rpoC Name (GenBank) DNA-directed RNA polymerase   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism vsc  Vibrio scophthalmi Pathway vsc03020   RNA polymerase Brite KEGG Orthology (KO) [BR:vsc00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     VSVS12_02935 (rpoC)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vsc03021]     VSVS12_02935 (rpoC)    03400 DNA repair and recombination proteins [BR:vsc03400]     VSVS12_02935 (rpoC) Enzymes [BR:vsc01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      VSVS12_02935 (rpoC) Transcription machinery [BR:vsc03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      VSVS12_02935 (rpoC) DNA repair and recombination proteins [BR:vsc03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       VSVS12_02935 (rpoC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Peptidase_M23 Apocytochr_F_C RPOC_hybrid Motif Other DBs NCBI-ProteinID:  ANS86663 UniProt:  A0A1B1NSK6 LinkDB All DBs Position 1:complement(3177835..3182037) Genome browser AA seq 1400 aa AA seqDB search MKDLLNFLKAQHKTEEFDAIKIGLSSPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRDRMGHIELASPVAHIWFLKSL PSRIGLLMDIPLRDIERVLYFEMYVVTEPGMTDLEKSQMLTEEEYLDRLEEWGDEFTAKM GAEAIKDLLGSMDMHAEVEQMREELETTNSETKRKKLTKRLKLVEAFITSGNNPEWMILT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELAAPDIIVRNEKRMLQ ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY LRLHQCGLPKKMALELFKPFIYSKLETRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTRDKINVKGEGMYLAGPEEAEKAYRTK NAELHARVKVRITETVVDEDGNSTTETKMVDTTVGRAMLWQIVPAGLPYSIVNQKLGKKQ ISNLLNECYRKLGLKDTVVFADQIMYTGFAYAALSGVSVGINDMVVPDAKYTEISAAEEE VREIQEQYQSGLVTAGERYNKVIDIWASTNDRVAKAMMENLSYETVTNRDGEEEQQESFN SIYMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFKEGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDVVVTEHDCGTVEGVDMMPHIEGGDVKVPLAELAL GRVVAEDVLKPGSEDVLIPRNTLIDEKWCQIMEENSVDSMKVRSVVTCDADFGCCAQCYG RDLARGHLVNQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASTAAAENSIQAKNTGSVKL HNAKFVINKAGKLVITSRASEMTIIDEFGRTKEKHKLPYGSILSKADNDAVTAGDVVANW EAHTMPIITEVAGRIQFVDMIDGVTVSRQTDDLTGLSSSEVTDPAARPAAGKDMRPAIKL VDEQGNDVMIPGTDMPAHYFLPGKAIVNIEDGAEVGIGDTLSRIPQKSSGNKDITGGLPR VADLFEARKPKEPAILAEHTGAVSFGKETKGKRRLVITRDSGEVYEEMIPKHRQLNVFEG EKVERGDVIADGPETPHDILRLRGIHAVTQYIANEVQEVYRLQGVKINDKHIETIVRQML RKCTITHAGDSEFLPGEQVEYHNVKIANRNLEAEGKEPARFERDLLGITKASLATESFIS AASFQETTRVLTEAAVSGKRDELRGLKENVIVGRLIPAGTGFAYHQERQAKRAEEQEGPS AEQATDNLAALLNAGFSSED NT seq 4203 nt NT seq  +upstreamnt  +downstreamnt gtgaaagacttattaaactttctaaaagcgcagcataagaccgaagaatttgatgcaatc aaaatcggtctatcttcaccagacatgatccgttcatggtcttttggtgaagttaaaaaa cctgaaacgattaactaccgtacgttcaaacctgaacgtgatggtttgttctgtgcgcgt atttttggcccagtaaaagactacgaatgtctttgtggcaaatacaagcgcctgaagcac cgtggtgtaatctgtgagaagtgtggcgttgaagttacacaaactaaagttcgtcgtgac cgtatgggccacatcgagctagcttcaccagttgctcacatctggttcctaaaatcacta ccgtctcgcatcggtctactaatggatatcccgctacgtgatatcgaacgtgttctttac ttcgaaatgtacgttgtaactgagccgggtatgactgatctagaaaaatctcagatgctt actgaagaagagtatctggatcgtctagaagagtggggcgatgagttcacggctaaaatg ggtgcagaggctatcaaggaccttctaggttctatggacatgcacgcagaagttgaacaa atgcgcgaagagttagaaaccactaactcagaaactaagcgtaagaagctgactaagcgt ctgaaactggttgaagcgttcatcacttcgggtaacaaccctgagtggatgatcctaact gtacttccagttcttccgccagatctgcgtcctctagtaccactagatggcggtcgtttt gcgacttcagatctgaacgacctttaccgtcgtgtgatcaaccgtaacaaccgtttgaag cgtcttctagagctagcggctccagacatcatcgtacgtaacgaaaaacgtatgctgcaa gagtctgttgatgcccttctagataacggtcgtcgcggtcgtgcgatcacaggttctaac aagcgtcctctgaaatctcttgctgatatgatcaagggtaaacaaggtcgtttccgtcag aaccttctaggtaaacgtgtagactactctggtcgttctgtaatcacagtaggtccatac cttcgtctacaccagtgtggtcttcctaagaagatggcacttgagctatttaagccgttt atctacagcaagctagagactcgtggtcttgcgactacaatcaaagctgctaagaaaatg gtagagcgcgaagaagcagtcgtttgggatatcctagacgaagtgatccgtgaacaccca gtactattgaaccgtgcaccaacacttcaccgtcttggtatccaggcgttcgaaccagta ctaatcgaaggtaaagcgattcagctacacccactagtgtgtgcggcatacaacgcggac ttcgatggtgaccaaatggcggttcacgtgcctctaactctagaagcacagcttgaagct cgtactctgatgatgtcgacgaacaacattctgtcgccagcgtcaggtgatccgatcatc gtaccttctcaggacgttgtattgggtctgtactacatgacacgtgacaagatcaacgtg aaaggtgaaggcatgtaccttgctggccctgaagaggctgagaaggcataccgcactaag aacgctgaactacacgcacgcgttaaagtacgtattactgaaactgttgttgatgaagac ggtaacagcacaactgaaacgaagatggttgatacaactgtcggtcgtgcaatgttgtgg caaatcgttccagcaggtctaccgtacagcatcgttaaccaaaagctaggtaagaagcaa atctctaacctacttaacgagtgttaccgtaagcttggtctaaaagacacagtagtattt gctgaccaaatcatgtacaccggttttgcttatgcagcactatctggcgtatctgttggt atcaacgacatggttgtgccagatgcgaagtacactgaaatttcagcagcagaagaagaa gttcgcgaaattcaagaacagtaccaatctggtcttgtaactgcgggcgaacgatacaac aaagttatcgatatctgggcatcaacgaacgaccgcgtagcgaaagctatgatggaaaac ttgtcttacgaaactgtgactaaccgtgacggtgaagaagagcaacaagaatcgttcaac agcatctacatgatggccgactcgggcgcacgtggttctgcagctcagattcgtcagctt gctggtatgcgtggtctgatggctcgtccagatggttcgatcatcgaaacgccgatcact gcaaactttaaagaaggtctaaacgtccttcagtactttatctcaacgcacggtgctcgt aagggtcttgcggatacagcactgaaaacagcaaactcgggttacctaactcgtcgtcta gtagacgttgctcaagacgttgtagttactgaacatgactgtggcactgttgaaggtgtt gacatgatgcctcatatcgaaggtggtgacgttaaagttccactggctgagctggctcta ggtcgtgttgtagcggaagatgttcttaaaccgggttctgaagatgttctaattccacgt aatactctaattgatgagaagtggtgtcagatcatggaagagaactctgtagacagcatg aaagtacgctctgtcgttacttgtgatgctgacttcggttgttgtgcacagtgttacggt cgtgacctagcacgtggtcacctagtaaaccaaggtgaagcagttggtgttatcgctgct cagtctatcggtgaaccaggtacacagctaacgatgcgtacgttccacatcggtggtgcg gcatctactgcagcagcagagaacagcatccaagcgaagaatacaggttcggttaagctt cataacgctaagtttgtaatcaacaaagctggcaagcttgtaatcacttctcgtgcatct gaaatgaccatcattgatgagttcggtcgtacgaaagagaaacacaaactgccatacggt tcgattctaagcaaagcggacaacgatgcggtaacagctggcgacgtagttgctaactgg gaagcgcacaccatgccaatcatcactgaagtggcaggtcgcatccaattcgttgacatg atcgacggtgtaacagtttctcgccaaacagatgacctaacgggtctatcttcaagcgaa gtaactgatccggctgctcgcccagctgcaggtaaagatatgcgtccagctatcaaactt gtagatgagcaaggtaacgatgtaatgatccctggtactgatatgccagctcactacttc ctacctggtaaagcgatcgttaacatcgaagatggcgcagaagttggcattggtgacaca ctatctcgtatccctcaaaaatcgagcggaaacaaagatatcaccggtggtctaccacgc gtagcagacctattcgaagctcgtaagcctaaagagcctgcgatcctagctgagcacact ggtgcagtaagctttggtaaagaaacgaaaggtaagcgtcgtctagtgatcactcgcgac agcggtgaagtttacgaagagatgattcctaagcatcgccaattgaacgtgttcgaaggc gagaaagtggaacgtggtgatgttattgcagatggtccagagaccccgcatgacattcta cgtctacgtggtatccacgcagtaactcagtacatcgctaacgaagtacaagaagtttac cgtctacaaggcgttaagattaacgataagcacattgagactatcgttcgtcaaatgcta cgtaagtgtactattacacacgcgggtgactctgagttcctacctggcgagcaagttgaa tatcacaatgttaagattgctaaccgtaatctagaagctgaaggcaaagagcctgcacgt tttgaacgtgaccttctaggtatcactaaagcatctctagcaactgagtcgttcatctct gcggcatcgttccaggagacaactcgcgtactaacagaagctgcggtttctggtaagcgt gatgagctacgtggtctgaaagaaaacgtaatcgtgggtcgtctgatcccagcgggtact ggtttcgcataccaccaagagcgtcaagctaagcgcgctgaagagcaagaaggtccatct gctgaacaagcaacagataacctagcagcacttctaaacgctggcttctcttctgaagat taa

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