Vibrio scophthalmi: VSVS12_03014
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Entry
VSVS12_03014 CDS
T04650
Symbol
trmA
Name
(GenBank) tRNA (uracil(54)-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_03014 (trmA)
Enzymes [BR:
vsc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
VSVS12_03014 (trmA)
Transfer RNA biogenesis [BR:
vsc03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
VSVS12_03014 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Methyltransf_31
Methyltransf_11
Methyltransf_12
TRM5-TYW2_MTfase
Cons_hypoth95
DUF6579
PrmA
Methyltransf_15
DREV
Motif
Other DBs
NCBI-ProteinID:
ANS86723
UniProt:
A0A1B1NSR0
LinkDB
All DBs
Position
1:3263400..3264509
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AA seq
369 aa
AA seq
DB search
MATLDVNPQHYQQQLAEKVERLTGMFANYNVPELEVFESPEQHYRMRAEFRVWHEGEDMY
YIMFDQQTREKYRVDQFPAASRLINDLMPLLIDAMKDNESLRRKLFQVDFLSTKSGEILV
SLLYHRQLDEAWIENAKALKQRLNDEGFNLNLIGRARKMKVVLDRDFVIEKLDVNGQPYI
YQQVENSFTQPNAAVSEKMLAWAVDCTQDSSGDLLELYCGNGNFSLALAQNFNRVLATEL
AKPSVESAQYNIAANKIENVQILRLSAEEFTQAIEGQREFRRLKDAGVDLASYNCNTIFV
DPPRSGMDIDTCKMVQGYERIIYISCNPETLQENLDILSETHNVTRFALFDQFPYTHHME
AGVMLERKA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgtaaaccctcaacactaccaacagcagttggccgaaaaagttgaa
cgtctcacagggatgtttgctaactacaacgtgccagagctagaagtgtttgaatctcca
gagcagcactaccgtatgcgtgccgagtttcgtgtatggcacgaaggcgaagacatgtac
tacatcatgtttgaccaacaaactcgtgaaaagtaccgtgttgaccagttccctgccgcg
agccgtttgatcaacgatctgatgccgttattgattgatgcgatgaaggacaatgaatca
ctgcgtcgtaaactgttccaagtcgattttctgtcgaccaagagcggagagattttggtg
tcgctgctttaccatcgtcaacttgacgaggcatggattgaaaacgcaaaggcactaaaa
cagcgtcttaatgatgagggctttaacctcaaccttatcggccgtgcacgtaaaatgaaa
gtggtgctggatcgtgactttgttatcgagaaactcgatgttaatggccaaccatacatc
taccaacaagtcgaaaacagttttacgcaaccaaatgcggcggtttctgaaaagatgctg
gcatgggcggtagactgcacgcaagatagcagtggcgatttacttgagctttactgtggt
aacggtaacttctctttagcgctggcgcaaaacttcaatcgtgtattagcaactgaactg
gctaaaccatcggtagaatcagcgcaatacaacattgctgcaaacaagattgaaaacgta
caaattctacgtttatcagccgaagagttcactcaagcgatcgaaggacagcgtgagttc
cgtcgtctaaaagatgccggcgttgatctggcgagctacaactgtaataccatcttcgtt
gatccacctcgttcaggtatggatatcgacacctgtaaaatggtgcagggctacgagcgc
atcatttacatctcttgtaatccagaaacgttgcaagaaaacctagatatattgagtgag
acacacaatgtcactcgttttgctctattcgatcagttcccatatacccatcacatggaa
gcaggcgtaatgttagagcgtaaggcgtag
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