Vibrio scophthalmi: VSVS12_03437
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Entry
VSVS12_03437 CDS
T04650
Symbol
treX
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00500
Starch and sucrose metabolism
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VSVS12_03437 (treX)
Enzymes [BR:
vsc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VSVS12_03437 (treX)
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GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Motif
Other DBs
NCBI-ProteinID:
ANS87146
UniProt:
A0A1B1NU04
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Position
2:complement(422883..424841)
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AA seq
652 aa
AA seq
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MTVTNSSPYPLGATLTQQGCNFAIHSPDCPDIQLALFDDSGSYTTHPLEHEYAGVKHTYI
TDIQAGQKYGYITTINGQLHYLADPYAKALERELSYTLPFNAEKSFKLAKCVVTNDKFDW
QDVIKPNRPRDEMVLFETHVKGVTKCNPNVSTSQQGRYLGLISEAMLTFYREQNINTIQL
MPITACMHEPHLLSMRKVNYWGYNPYLFMVPDPRYAEYDAVFELKTTIRELHRHGIEVIL
DVVYNHTAEGGSDGPAFNLRALDKHHYLTHGHHFANYTGCGNTVNLAYQPSLNLIMDTLR
YWVNEFHIDGFRFDLAATLGREGDQFNPNSGFFKAVAQDPVLKQTKLIAEPWDIGPNGYQ
VGNFPQGWNECNDRLRDISRSFWRGDNGYLKELATRLMGSRDLYSAANWPYRLTVNYITY
HDGFCLQDLVSYKSKHNEANGEQNRDGHGDNRSANYGIEGPSDRQSVTSLREKQKRNFMA
TLLFSFGIPHILTADVLSHTQKGNNNAYCQDNEISWLNWQLDQHQQDFKQWLAEMVAARQ
CYMLPFIRAFSGESRNHNRIFWRRLDGKDLSHDDWNQLTAVALHLGIDEHGDELFYCINQ
TNAPARFSLPSEDQQQWNMICNTGGLDLHQTIDGKQILLEPVSIAIFHFSPS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgactaattcaagcccatatccgctcggtgccactctaactcaacaagggtgt
aactttgcgattcattctccggactgccctgacattcaactggcgttgtttgacgattct
ggcagttatactactcatccattagagcatgaatatgcgggcgtgaaacacacttacatt
accgatattcaagcaggtcaaaaatacggatacatcacaacaatcaacggccaattacat
tacctcgctgatccctatgccaaagctctagagcgtgaactgagttacaccttaccgttt
aacgctgaaaaaagttttaagctggctaaatgtgtcgtgactaatgataaatttgactgg
caagacgtaatcaaacccaaccgacctcgcgatgaaatggtgttgtttgaaactcacgta
aagggcgtcactaagtgcaaccctaacgtttcaactagccagcaaggtcgctatcttggc
ttgatcagtgaagcgatgttgaccttctaccgtgaacaaaacatcaacacgattcaacta
atgccgatcacagcctgtatgcatgaacctcacctactctcaatgcgcaaggtgaactat
tggggatacaatccttatctcttcatggttcctgatccacgttacgcagaatacgatgcg
gtctttgagctcaaaaccaccattcgagaactgcaccgtcatggtattgaagtcattcta
gatgtagtctacaaccacacagcagaagggggcagcgatggaccagcgtttaacctcaga
gcactcgacaagcatcactacctaactcatggccaccattttgccaactacactggttgt
ggtaacaccgtcaacttagcgtatcaaccatcacttaacttaattatggatacccttcgt
tactgggttaacgaattccatattgatggtttccgtttcgatctcgcagccactcttggt
cgtgaaggtgatcaattcaatccaaacagcggttttttcaaggctgttgcgcaagatccc
gtcctcaagcaaaccaaactcattgcagagccttgggatatcggaccaaatggttatcaa
gtcggtaatttcccgcaaggttggaatgaatgtaatgatcgcttacgcgatattagccgg
agcttttggcgcggtgacaatggctatctaaaagagctcgcgacacgcttaatgggatca
cgagatctctatagcgccgccaactggccttatcgcctcactgtcaattacattacttac
catgacggcttctgcctgcaagatctggtctcctataagtctaaacataacgaagctaac
ggagagcaaaaccgtgacggacacggtgacaaccgttcggcaaactatggcattgagggg
ccatcagatcgtcaatctgtgaccagtctgcgtgaaaaacaaaaacgcaattttatggcc
acactgctgttctcatttggtattccacacattttaaccgctgatgtgttgtcacataca
caaaaaggcaataacaacgcgtattgccaagacaacgaaatcagttggctaaattggcaa
ttagatcagcatcagcaggactttaaacaatggttagcagagatggttgcagcacgacaa
tgctacatgctgccctttattcgcgcattcagtggcgagagtcgtaatcacaatcggatt
ttttggcgccgtctcgatggtaaagatctctcccatgatgattggaatcagctcaccgcg
gtcgccttacaccttggaatcgacgaacatggcgatgaactattttattgcatcaaccaa
accaacgcaccggcgcgattcagcttgccgagtgaagatcagcagcaatggaatatgatc
tgtaatactggcgggttagatttgcatcaaacgattgatggtaagcaaatcctacttgaa
ccggtttcaatcgcaatttttcatttctcacctagttag
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