Vibrio scophthalmi: VSVS12_03625
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Entry
VSVS12_03625 CDS
T04650
Name
(GenBank) Nuclease SbcCD subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_03625
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VSVS12_03625
Archaeal homologous recombinant proteins
VSVS12_03625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
DNA_pol_E_B
ATPgrasp_N
PcrB
Motif
Other DBs
NCBI-ProteinID:
ANS87326
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All DBs
Position
2:634953..636125
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AA seq
390 aa
AA seq
DB search
MKFLHTSDWHLGRQFHNVSLLDDQQAVLEQIIAYVEQNPVDALVIAGDIYDRSVPPIAAI
ELMNHFIDKVCGELSLPIILIPGNHDGAQRLGFAASQMKNSGLHILANFDDMLTPVVIAS
DVGEVAFYGMPYNDPELVRHYYQSQLTSEPNASAVSIKDHDDAHKLLAECITAQFNPQQK
NVLISHCFVDGAIESESERPLSIGGSDRVSHQHFVPFDYVALGHLHQPQKKGEEYIRYSG
SLMKYSFSEQHQAKGMTLVELDQDGFKSATHIPLTAPHQMRIIDGEMEAILAQGKSDPNR
HNYLLVRLQDKHAILDPMEKLRKVYPNVLHLEKPGMLIGVDQQLGKARLARGELDMFKDF
FLEAKQDSMTEAQEQAVSQVIEQLTRHTEA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctccacacctccgattggcacttaggccgacaattccacaacgtctctctg
cttgacgatcaacaagcggtactcgagcaaatcattgcttatgttgagcaaaatccagtg
gatgccttagtgattgctggtgatatctacgatcgaagtgttccaccaatcgcagcgatt
gaattgatgaatcatttcatcgataaagtgtgtggagagctatcactaccgattattctt
attcctggcaatcatgatggtgcgcagcgcctcggttttgctgcaagccaaatgaaaaat
tcgggcctgcacattttagccaattttgacgatatgctcactcccgtcgtcattgccagt
gatgttggtgaggtggccttttatggtatgccttacaatgatccggaattagtgcgccat
tattaccagtctcaattgacttctgaaccgaatgcctccgcagtttctattaaagatcac
gatgatgctcataagttgttggctgagtgcattactgcacaatttaacccgcagcagaaa
aatgtgttgattagccactgctttgttgatggtgcaattgagtctgaatctgaaagacct
ttgtcgattggtggatctgatcgcgttagtcatcaacattttgtgccatttgattatgtt
gcgctaggccatttacatcagccgcagaagaaaggcgaagagtatattcgttatagcggt
tcgttgatgaagtacagcttttcggagcagcaccaggctaaaggcatgaccttggttgag
ttagatcaagatggctttaagagtgcgacacatattccgctcaccgcgccgcaccaaatg
cgtattattgatggtgaaatggaggcgattttagcgcaaggtaagagcgatcctaatcgc
cacaattacctattggttagattgcaagataagcatgccattctcgatccaatggaaaag
ttgcgtaaggtttaccccaatgttttacaccttgagaaaccgggaatgttgattggtgtt
gatcaacaactgggtaaagcgcgtttagcgcgcggtgaacttgatatgtttaaagatttt
ttcctcgaagccaagcaagattcaatgaccgaagcccaagagcaggcggttagccaagtt
atcgagcaactgactcgtcacacggaggcttaa
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