Vibrio scophthalmi: VSVS12_04151
Help
Entry
VSVS12_04151 CDS
T04650
Name
(GenBank) Mediator of RNA polymerase II transcription subunit
KO
K07114
Ca-activated chloride channel homolog
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_04151
Transporters [BR:
vsc02000
]
Other transporters
Pores ion channels [TC:
1
]
VSVS12_04151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_6
TPR_7
TPR_14
TPR_11
TPR_8
TPR_16
TPR_12
Motif
Other DBs
NCBI-ProteinID:
ANS87851
LinkDB
All DBs
Position
2:1226157..1228094
Genome browser
AA seq
645 aa
AA seq
DB search
MSEFVFLYPIWLIGVAGWLVLSYWLFSRRRTQSLIAPHLAQALNMRAAKASKLKYYVIAL
SGVLAFIALAGPSFSQIEKPSFTSNSARVLILDMSLSMYANDIQPNRLSQARYKAMDLLK
QWREGSTGLVVYSADAYLVSPLTNDSNTLISLIPSLSPAIMPYQGADAASGVRLAIDTLV
NAGFAHGDIVLISDDLDNHETQAIDALIQDSPWRLSILGVGSSSGAPIPLPNGSLLENGT
GNTVVAKTDFGNMQQAARLGDGVFVSVQPDNSDINAIATMTNQIESAEKSASDNRVRDRQ
NSGYWLTLVLIIPALFLFRRGSVFAVLIALPLLMPSPAAQANPFLTDDQQAHRLFEQEEY
QQAADLFKDQRWKGAAQYQAGDYENAIESLQSFDDIDSQYNLANSLAQAKQYQQAIDKYE
QVLATDPNYQDALRNLETVKKVLEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQNGQESQPSSQEQSENEQSQQSQQSQQSQQSQQSQQSQQSQQSQQSQQSQQSQQAENG
DQAQGKQAEKQSKPKASHSQDNANNSNEKDQQVNSENDLLKQKQNESEGMAQANSSTPAQ
NPREDAAFRKLEQVEAARDPSQLIRAQILLQAQQKQPPKESNKQW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttgttttcctataccctatctggctaataggggttgccggctggttggtc
ttaagttattggctattttctcgtcgacgcactcaaagcctgattgctccgcaccttgcc
caagctctcaatatgcgagcagccaaagcgtcaaagctaaaatactatgttatcgctcta
tctggagtgctggcttttattgctcttgcagggcctagctttagccaaatcgaaaaacct
agctttaccagcaatagtgcgcgagtgttgattttagacatgtcactctcgatgtatgcc
aacgatatccaaccaaatagactgagccaagcgcgctacaaagcgatggatttgctcaaa
caatggcgtgaaggttctactggcttggtagtctattctgcggatgcctatttagttagc
ccactcaccaacgacagtaatacgctaattagcctcatccctagcctctcgcctgccatc
atgccttatcaaggtgccgatgccgcctctggggttagactggcgatagacactttagtg
aatgcaggttttgctcacggcgacattgttttaatcagtgacgatctcgacaatcacgaa
actcaagctattgatgcgcttatccaagattcgccgtggcgtcttagtatcttaggggta
ggttcttcttctggcgcgcccattcctttgcctaatggtagcctactcgaaaatggtact
gggaatacggtggtcgctaaaacagatttcggtaacatgcagcaagctgcgcgattaggg
gatggtgtttttgtttcagttcaaccagacaacagcgatatcaatgctatcgcaaccatg
accaaccaaattgaaagcgcagaaaaaagcgcttcagacaatcgtgttcgtgaccgacaa
aacagcggctattggttaactctcgtactaattatacctgctttatttctatttcgtcga
ggaagtgtcttcgctgtgcttattgcgctgcctttgttaatgccgtcaccagccgcacaa
gctaatccttttctcaccgatgatcagcaggctcatcggttatttgaacaagaagaatat
caacaagcggctgatttatttaaagatcaacgctggaaaggggccgcgcaatatcaagcc
ggtgactacgaaaacgcgattgaatctctgcaatcttttgatgatattgacagccaatac
aacttggcgaactcactcgcgcaagcgaagcaataccagcaagccattgataaatatgag
caggtattggcgacagatcctaattatcaagacgcactacgcaacttagaaaccgtgaaa
aaagtgctcgaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaa
cagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaa
cagcaacaaaatggtcaagaatcacaaccatcgagtcaagaacaatcagagaatgagcag
tctcagcagtctcagcagtctcagcagtctcagcagtctcagcagtctcagcagtctcag
cagtctcagcagtctcagcagtctcagcagtctcagcagtctcagcaagccgagaatggc
gatcaagctcagggcaagcaagcggaaaaacaatctaaaccaaaggcatcccactcccaa
gacaatgccaataacagtaatgaaaaagatcagcaggttaattcggaaaacgatttgcta
aagcagaagcagaatgagagtgaaggcatggcacaagccaattcctcaacaccagctcag
aaccctcgcgaagacgcagcctttcggaaactggaacaagtagaagccgctcgagatcct
agccaactgatccgtgctcagatactgctacaagcacaacaaaaacaaccacctaaagag
tcgaacaaacaatggtaa
DBGET
integrated database retrieval system
