Vibrio scophthalmi: VSVS12_04240
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Entry
VSVS12_04240 CDS
T04650
Name
(GenBank) putative HTH-type transcriptional regulator YisV
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsc03000
]
VSVS12_04240
Transcription factors [BR:
vsc03000
]
Prokaryotic type
Helix-turn-helix
GntR family
VSVS12_04240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
Rrf2
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ANS87939
LinkDB
All DBs
Position
2:1337155..1338597
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AA seq
480 aa
AA seq
DB search
MSRISPHIDIGDLCLPESDATLQARLFHAIRDKIVHGLWPLAGKLPSTRKLALELNLSRN
TVIATYEQLLCEGYIESQRGSGFYVTLELPEHYLNTKNTADTPASHSKLKQDINRSFAPG
IPDLAQFPLKKWQRYLQRHSSRTHILGNSDLQGVLELRSALSSYLASSRSVVCRPEQIII
TSGAQQGLAIAALAILQRDEKILLEQPGYVQADKVMSLVDAQKCYVDVSPFKGVDIEQVI
TSKAKALYITPSNQYPMGTTINSEQRLKLIDWASQGKRWIIEDDYDSEFQFAHRPHTSLQ
GLAAQIGLDNCVIYIGSFSKVMFNGLRLGYMVVPDSLVEQCLAMKDALSGDSPVHTQYAL
ADFIAEGELLRHIRKMRRLYKAKHQAMLSAITLYFSHHVEVISQAAGLHITLRWQGKIDE
ETLRQRALNINLILRTLSYYQPHDKSSRDWHGVVLGFGNTSLEQIPVLVEQLANEFFKNN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatttcacctcatattgatattggcgatctctgcttaccagagagtgacgcc
actttacaagcgcgcttatttcatgcgattcgcgataagatcgtgcacggattgtggcca
ctagcaggaaaactcccctcaacccgaaaactggctttagagcttaatcttagccgcaat
accgttattgccacctacgaacaattgctgtgtgaagggtacattgagagccagcgaggt
agtggattttacgttacactcgaactaccagagcactatttgaacaccaagaataccgcc
gatactcctgcatcacatagcaaactgaaacaagatatcaatcgatcgttcgcgcctggc
attccagatctcgcccaattcccattgaagaaatggcaacgttatctgcaacgtcacagc
tctcgcacgcatattttaggtaatagtgatttacaaggcgtactggaattgcgcagtgct
ttatcaagttatttagcctctagccgttcagtagtctgtcgtccagaacagatcattatc
acttctggcgcgcagcaggggcttgccattgctgcactagccattctccaacgagacgaa
aaaattttgcttgagcagcccggctatgtccaagccgataaggtgatgagtttggtcgat
gcacagaaatgctatgttgatgtctccccgtttaaaggcgtggatattgagcaagtcatt
acaagcaaagctaaggcgctttacatcacccccagcaatcaatacccgatgggcaccacg
atcaacagtgaacaacgattaaaactgattgattgggcaagccaagggaagcgttggatc
atcgaggatgactacgatagcgagtttcagtttgctcaccggccacacaccagtttacaa
gggctcgcagcacaaattggcctagataactgtgttatctacattggctcattcagcaaa
gtaatgttcaatggcttacggttaggttatatggttgtacccgattctttagttgaacag
tgcctcgcaatgaaagacgcattaagcggtgattcacctgtccatactcaatacgccctc
gctgatttcattgctgaaggagaattgctgcgccacattcggaaaatgcgtcggttatat
aaagccaaacaccaagcgatgctaagtgctatcacgctgtattttagtcaccatgttgaa
gtaatcagccaagcggccgggctgcatattacattacgttggcaagggaagatcgatgaa
gagaccttacgccaacgcgcgctgaacattaacctcattctgcgcacattgagctactat
caaccacacgataaatcaagccgtgactggcatggagtggtgcttggctttggtaacacc
tcgctagagcagattcccgtcttagtcgaacaattggccaatgaattctttaaaaataat
tag
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integrated database retrieval system
