Vibrio scophthalmi: VSVS12_04285
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Entry
VSVS12_04285 CDS
T04650
Name
(GenBank) putative HTH-type transcriptional regulator YhgD
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsc03000
]
VSVS12_04285
Transcription factors [BR:
vsc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
VSVS12_04285
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GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_Tnp_1_2
HTH_7
Motif
Other DBs
NCBI-ProteinID:
ANS87984
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Position
2:1382266..1382874
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AA seq
202 aa
AA seq
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MIKRSDIKQDDIIKSAITVFSQKGFKQASMEGIAKEAGVSKRTLYKYYPNKEALFEVIVS
TLMCRFDEQCQAEFNPSVSIATQLAQLTLKQLCYINTDDFQATARLVIAECIRCPTASQM
LIQRFSAIEDTYGLQEWIRQGVEAKALNVANIELAIEQFIGSIKAVVFWPQLLAHQPPPS
CEELEQVVNAAVNGFVATYASK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaagaagcgacattaagcaagacgatatcattaaatctgccattacggttttt
tcgcaaaaaggctttaaacaagccagcatggaagggatagcgaaagaagcgggcgtatcc
aagcgtactttatacaaatactacccaaacaaagaggcgttatttgaggtcattgtcagc
acgttgatgtgtcgatttgatgaacaatgtcaggctgaatttaatccttcagtttccatc
gcgactcaattggctcaactcacactaaaacaactctgttatatcaatactgatgatttt
caagccactgcaagattggtgattgctgaatgtatccgctgtcctactgcatcacagatg
ctaatacaaagattttcggccattgaagatacttatggtcttcaagaatggatccgacaa
ggcgttgaagcaaaagcgctcaacgttgccaatattgaattagcgattgaacaattcatt
ggcagtattaaagccgtcgtattttggccgcaactcctagcccatcaaccaccaccaagt
tgcgaagaattagagcaagtagtaaacgccgccgttaacggtttcgtggcgacatacgcg
agcaagtaa
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