Vibrio scophthalmi: VSVS12_04294
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Entry
VSVS12_04294 CDS
T04650
Symbol
tarS
Name
(GenBank) Threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VSVS12_04294 (tarS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vsc01007
]
VSVS12_04294 (tarS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsc03016
]
VSVS12_04294 (tarS)
Enzymes [BR:
vsc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
VSVS12_04294 (tarS)
Amino acid related enzymes [BR:
vsc01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
VSVS12_04294 (tarS)
Transfer RNA biogenesis [BR:
vsc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VSVS12_04294 (tarS)
Prokaryotic type
VSVS12_04294 (tarS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
ANS87993
LinkDB
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Position
2:complement(1387967..1389895)
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AA seq
642 aa
AA seq
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MPIITLPDGSQRQFDNPVSTLEVAQSIGPGLAKATIAGRVNGQRVDACDLIEQDASLEII
TVKDEVDGLEIVRHSCAHLLGHAIKQLYPQAKMAIGPTIDSGFYYDIDLEESLTQDDLEK
IEKRMKELAKTKYEVVKKKVSWQEARDAFEARGETYKMEILDENVAHDDRPGLYHHEEYI
DMCRGPHVPNMGFCQHFTLLNVAGAYWRGNSDNKMLQRIYGTAFHDKKALKAHLTRLEEA
AKRDHRKLGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEVFVRSKLDEYGYQEVKGPLIM
DRVLWERSGHWDKYAEAMFTTSSENRDYALKPMNCPGHIQIFNQGLKSYRDLPLRMAEFG
SCHRNEPSGALHGIMRVRGFTQDDAHIFCTESQIQEEVTSCIKMVYDTYQTFGFDNIVVK
LSTRPENRVGSDEIWDQSEEALKLSLESMDIPYEIQEGEGAFYGPKIEFTLHDCLDRAWQ
CGTVQLDFNLPNRLGATYVGESNERLVPVMIHRAILGSLERFIGILIEEYAGFFPTWLAP
EQAVIMNITDKQADYAQEVAKKLQKSGIRAKADLRNEKIGFKIREHTLKRVPFMLVCGDQ
EMEAGEIAVRTRRGKDLGKFKVDDLITYIQAEITSRKLNLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattactcttcctgacggcagtcagcgtcaatttgacaacccagtttctact
cttgaagttgcacaatctatcggccctggtcttgcaaaagcaaccatcgctggtcgtgtt
aacggtcaacgcgttgatgcatgcgatcttattgaacaagacgcaagcctagaaatcatc
acagtaaaagatgaagtggacggtctagaaatcgttcgtcactcttgtgctcaccttcta
ggtcatgcaatcaagcagctttacccacaagcgaaaatggcgatcggtccaacgatcgac
agcggtttctactacgatatcgatctagaagagtcgctaacgcaagacgatcttgaaaag
atcgaaaagcgtatgaaagagcttgcgaagaccaagtacgaagttgttaaaaagaaagtt
agctggcaggaagcgcgtgacgcattcgaagcgcgtggcgaaacttacaaaatggaaatc
ttggatgagaacgttgctcatgacgaccgtccaggcctataccatcatgaagaatacatt
gacatgtgtcgtggtcctcacgtaccaaacatgggcttctgccaacacttcacactgttg
aatgttgcaggcgcttactggcgtggtaacagcgacaataaaatgctacaacgtatttac
ggtactgctttccatgataagaaagcacttaaggcgcacctaactcgccttgaagaagcg
gctaaacgcgaccaccgtaaactcggtaagcagcttgacctattccacatgcagcaagaa
gcaccaggtatggtgttctggcaccataatggctggtcaatcttccgtgatctagaagta
tttgtacgttctaagctagacgagtacggctaccaagaagtaaaaggtccacttattatg
gatcgcgttctttgggagcgttctggtcactgggacaaatacgctgaggcgatgttcacg
acttcttctgagaaccgtgattacgcactgaagccgatgaactgtccaggtcacattcag
atctttaaccaaggcctgaaatcttaccgtgatctaccattacgtatggctgagtttggc
tcatgtcaccgtaatgaaccatcaggtgctctacacggtatcatgcgtgtacgtggcttt
actcaagatgacgctcatattttctgtactgagagtcaaatccaagaggaagtgacgagc
tgtatcaagatggtttatgatacataccagacattcggttttgacaacattgttgttaaa
ctatcaacacgtcctgaaaaccgtgttggttctgatgaaatctgggatcaatcagaagaa
gcgcttaaactatctcttgaatcgatggatatcccatacgaaattcaagagggcgaaggt
gcattctacggtcctaagattgaatttactctacatgactgcttagaccgtgcgtggcaa
tgtggtacagtacagctagactttaacctaccaaatcgcctaggtgcgacttacgtaggc
gagagcaatgagcgccttgtaccagttatgatccaccgcgcgattttaggctctctagag
cgtttcatcggtattctaattgaagaatatgcgggcttcttcccaacgtggttggctcct
gaacaagcagtaattatgaacattactgacaaacaggctgattacgcacaagaagtagca
aaaaaattgcaaaaaagtggaattagagccaaagcggacttgagaaatgagaagattggc
tttaaaatccgcgaacatacattgaagcgtgtaccgtttatgctagtttgtggcgaccaa
gagatggaagcaggcgaaatcgcagtccgtacacgtagaggcaaggatcttggcaaattt
aaagtggatgatctaattacatacatccaagccgagattactagccgtaagctcaatctg
gaggaataa
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