Vibrio scophthalmi: VSVS12_04358
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Entry
VSVS12_04358 CDS
T04650
Name
(GenBank) L-carnitine/gamma-butyrobetaine antiporter
KO
K05020
glycine betaine transporter
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_04358
Transporters [BR:
vsc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
VSVS12_04358
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCCT
DUF4257
Motif
Other DBs
NCBI-ProteinID:
ANS88057
LinkDB
All DBs
Position
2:1445283..1446920
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AA seq
545 aa
AA seq
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MSNLTQSVARKSADENYLASHPPEQSDASNTVNAFSSPVLWLSGGFLVLFVLLAVFDTPT
LSSVIQVGFSKVTQWFGPFWQILLLANFIIGLYLAFARTGDVKLGNLKTPELDTFKWLAI
VLCTLLAGGGVFWAAAEPIAHFVSSPPFYGEAEGRTLALNALSQSFLHWGFLAWAILGSL
AAIVLMHLHYDKGLPLQPRTLLYPIFGDKAINGWIGTLTDTFCIIAVAAGTIGPIGFLGL
QISYALNSLFGVQDTLITQSLVVLFAIAMYTLSALSGLSRGIQLISRYNIILSAALIIFI
LLFGPTSFIIDGYMQGVAKMVNNFVPMALYRGDTDWLSWWTVFFWGWFIGYGPMMAIFIA
RISRGRTIRQLILSISIIAPLITCFWFSIVGGSGLAYELAEPGVISTAFEGFNLPGVLLA
ITAQLPMPSVIAVLFLILTTTFIVTTGDSMTYTISVVVTGSTQPSGAMRAFWGILMGLVA
IALISMGSGGISALQSFIVITAVPVSFVLLPSLWQAPQIAKAMAQQQFGEAMAQQQFGEA
SSTKA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttgacacaatctgttgctcgtaaatcagcagatgaaaattaccttgcttct
catccccccgaacaaagtgatgcatcaaacacggtaaacgccttctccagtccagtactc
tggttaagtggcggctttctcgttctcttcgtactgcttgctgttttcgatacccctact
ctgtccagcgtgattcaagttggattctctaaagtgactcaatggtttggcccattttgg
caaatacttttgctggccaactttattattggtctctatcttgccttcgctcgcacaggc
gacgttaaactcggtaatcttaaaaccccagagctcgacaccttcaaatggttggcgatt
gttctttgcaccttacttgctggcggtggtgttttttgggctgctgctgagccgattgct
cactttgtctcttcacctcctttttatggtgaagcagaaggtcgtaccctggcactcaat
gccttgtcacagtcattcctgcactggggattccttgcttgggctattctgggaagctta
gcggcgattgtcctaatgcacctgcattacgataaaggcttgccattacagcctcgtact
ttgctgtaccccatttttggtgataaggcgatcaacggctggattggcacccttacggat
actttctgtattatcgcggttgcggctggcaccattggaccaattggttttcttggtctg
caaattagctacgcacttaactctctatttggcgtgcaagatacattaatcacgcaaagt
ctggtggtactgtttgccatcgcgatgtataccttatccgctcttagcggtctgagccgt
ggtattcagctcatcagtcgctataacattattctttccgcggcactgattatcttcatc
ctgctatttggcccaacaagcttcattattgacggctatatgcaaggcgtggcgaaaatg
gtcaacaacttcgtacctatggcgctctatcgtggcgatactgattggcttagttggtgg
acggtatttttctggggttggtttattggttacggcccaatgatggcgatctttattgcg
cgaatttctcgtggtcgtactattcgccaattgattctctctatctccatcatcgcaccg
ctgatcacttgcttctggtttagcattgtcggtggttctgggcttgcttatgaactggcc
gaaccaggcgttatatcaacggcgttcgaaggatttaacctaccgggtgtcctgctagca
atcactgcccaactgcctatgccatcagtcattgcggtgttgtttttgattctcaccacc
accttcatcgtcacgaccggtgattcaatgacttacaccatcagtgtggtggtaacagga
tcaacgcaaccaagcggtgcaatgcgtgccttttggggaattttgatgggtctggttgcg
attgctctgatttcgatgggttccggcggcatatcggccttgcagtcattcattgtcatc
accgcagtaccagtgtcgtttgtgttattgccttcgttatggcaagccccacaaattgcc
aaagcgatggcacaacagcaatttggtgaagcgatggcacaacagcaatttggtgaagct
tcttcaacgaaagcataa
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