Vibrio scophthalmi: VSVS12_04360
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Entry
VSVS12_04360 CDS
T04650
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K19236
L,D-transpeptidase YcfS
Organism
vsc
Vibrio scophthalmi
Pathway
vsc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VSVS12_04360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vsc01002
]
VSVS12_04360
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
VSVS12_04360
Peptidases and inhibitors [BR:
vsc01002
]
Cysteine peptidases
Family C82
VSVS12_04360
Peptidoglycan biosynthesis and degradation proteins [BR:
vsc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VSVS12_04360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
ANS88059
LinkDB
All DBs
Position
2:complement(1447944..1448861)
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AA seq
305 aa
AA seq
DB search
MMLRKLLILCCCVSSTVFARSYELPPQDSKIVGRTQFHQIKKGESMADIAKQYDVGFLAL
MAANQGVDPFLPPVDYVLTIPTQVILPDVKREGVVINLAELRLYYFVPEQNVVHIFPVGI
GRIGRDTPEMVTKISQKRPNPTWTPPNSIRKEYLAKGVTLPAVVPAGPDNPLGEYALRLA
HGAGDYLIHGTNKDFGIGMRVSAGCIRMSPQDIEWLFEQVDLGEKVTVINAPVKISLEPD
RSVYIEAHEPLTRSDGSKTVLGIPQELTWWLQAMDQPEAKARAVILAQNGVPVEIVAPQE
LESPL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgcgtaagctgctcatactatgttgctgtgtcagctccacggtttttgcacgg
agctatgagcttccccctcaagacagcaagattgtcggtcgaactcaatttcaccaaatc
aaaaaaggtgaaagtatggctgatattgctaagcaatacgacgtcggcttcttagctttg
atggcggctaaccaaggcgtggatcctttcttgccgccggttgactacgtcttgaccatc
ccaacgcaagtgatcttgccggatgtgaaacgtgaaggtgtggtgattaaccttgccgag
ttgcgcttgtactattttgttcctgagcaaaacgtggtgcacatctttccggtcggaatt
ggacgcatcggacgtgatacgccagaaatggtgactaaaattagccaaaaaaggccgaat
ccaacttggacaccaccgaactcgattcgtaaagaatatttagcaaaaggggtgactcta
ccagcggttgttcccgctgggcctgataatccgttgggtgaatatgcactgcgtttagct
cacggcgctggggactatttaattcacggtaccaacaaagattttggtattgggatgcga
gtgagtgcgggttgtattcgtatgtcaccacaagatattgaatggctttttgagcaggtt
gacttaggtgagaaagttaccgtcattaatgcaccggttaaaattagcttagagcctgac
cgaagtgtctatattgaagctcatgaaccgttaacacgcagcgatggtagtaaaaccgtg
ctaggcataccacaagagctaacatggtggttgcaagcaatggatcagcctgaagcgaaa
gctcgtgcggtgatcttggcgcaaaatggtgtgccagttgagatagtggcgccccaagag
ctagagtctcctctgtaa
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