Vibrio scophthalmi: VSVS12_04361
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Entry
VSVS12_04361 CDS
T04650
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_04361
Enzymes [BR:
vsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VSVS12_04361
DNA repair and recombination proteins [BR:
vsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VSVS12_04361
Prokaryotic type
VSVS12_04361
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANS88060
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All DBs
Position
2:complement(1448858..1450309)
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AA seq
483 aa
AA seq
DB search
MQLMWFRRDLRVEDNTALQSAINSQQAVIAIYVATPDSWRNHHLSPIQADLIYRRLFELQ
QDLAQLNIPLLYMEVENYQQCVQQVSDCAQRYGAERVVFNREYEVNEQDRDDLLHSHSEI
EIQGFDDKCLLPPGSVLNKQGQYFKVFTPFKRAYLARLNENLPPVVKTTAVRDDSTNILD
IKAEQKESYPALLSPQSVFSYPRESSERYVVNSKAIRQLLREFCHERVDNYHNDRDKPAL
NATSMLSPYLAIGALSVRQCVARVLYSAQAHQITSPFLGEGIHTWISELVWRDFYQHLLH
FEPKLCKGRHFVTWTEKLHWPGSKQHLAAWQKGMTGYPIVDAAMRQLNQTGWMHNRLRMV
VASFLAKDLHLHWHHGERYFMQKLVDGDYAANNGGWQWSASTGCDAQPYFRIFNPTAQGE
RFDPDGDFIRHWIPELSAVPNKFIHQPWRWENVISLSYPKPMVDHKSEREITLRLFQDAK
DFQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcatgtggtttcgccgtgatctacgcgttgaagataatacggctttgcaaagc
gcgataaattcacaacaagccgttattgcgatttacgttgccacgcccgatagttggcga
aaccatcaccttagtccaattcaagcggatttgatttatcgtcgtctatttgagctacag
caagacttagcacaactcaatattcccttgctatacatggaagttgaaaactatcagcaa
tgtgttcagcaggtgagtgattgtgctcagcgctatggtgcagagcgtgtggtatttaat
cgcgagtatgaggtcaatgaacaagatcgtgatgatttactacacagccacagcgagatt
gaaattcagggttttgatgataagtgtttgctccctccaggctccgtactcaacaaacaa
ggtcagtactttaaagtttttaccccgtttaaacgtgcctatttagctcgtttaaacgaa
aatctaccgccagtggtaaaaactaccgcagtacgagacgattcgacgaacatattggat
atcaaggcggagcagaaagagtcatatccagcacttttatcaccgcaaagtgttttctct
tatccacgtgaatcgagtgagcgatatgtggttaacagcaaagcgattcgtcaattgtta
cgtgagttttgccacgagcgggtcgataactatcacaacgatcgtgacaaaccagcgcta
aacgcgacaagcatgctttcaccttatcttgccattggcgctttgtcggttcgacaatgt
gtggctcgggttctctactctgcccaagctcatcagataaccagccccttcttgggggaa
ggcatccacacttggatcagtgaattggtgtggcgagatttttatcaacatttactacac
tttgaaccaaagctctgtaaaggtcgccatttcgttacgtggacagaaaaactgcattgg
cccgggagtaaacaacatttagcggcctggcaaaaagggatgacaggctatccaattgtc
gatgccgcgatgcgtcaacttaatcaaaccggctggatgcacaaccgcttgagaatggtc
gtggccagtttcttggctaaggacttgcatcttcactggcatcatggtgaaaggtatttt
atgcagaagctggtggatggagactatgcggccaacaatggagggtggcagtggagtgct
tcgacggggtgcgatgctcagccttattttcgtatctttaatccgaccgcgcaaggtgag
aggtttgatccagacggtgattttattcgtcattggatcccggagttaagcgcagtaccc
aacaagtttattcaccaaccttggcggtgggaaaatgtcattagcttgtcatatcctaaa
ccaatggttgatcacaaaagcgaaagagagataaccttacggctctttcaagatgctaag
gatttccaatga
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