Vibrio scophthalmi: VSVS12_04371
Help
Entry
VSVS12_04371 CDS
T04650
Name
(GenBank) Putative ABC transporter ATP-binding protein
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vsc02000
]
VSVS12_04371
Transporters [BR:
vsc02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
VSVS12_04371
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
DUF3744
AAA_21
SMC_N
AAA_29
RsgA_GTPase
AAA_23
AAA_16
AAA_22
Mg_chelatase
nSTAND1
AAA_18
nSTAND3
AAA_15
AAA_14
AAA_24
PduV-EutP
AAA_13
DUF87
AAA_28
AAA_33
KH_9
Rsm22
Motif
Other DBs
NCBI-ProteinID:
ANS88070
LinkDB
All DBs
Position
2:1460788..1462482
Genome browser
AA seq
564 aa
AA seq
DB search
MTIEFSNFSFRYQSLDKPTLKNINLRIEQGEKIVIIGPSGSGKSTLGQCLNGLIPHAISG
EISGHLTINGQVTSALDLHAFTEQVGTVLQDTDSQFVGLSIGEDIAFALENQCMSNIEMY
PLVKATAKMVDLADMLERSPHDLSGGQKQRVSLAGILVDDVDILLFDEPLAALDPKTGRK
TIEIIDELHQKTNKTIVMIEHRLEDVLHRNVDRVILMEQGEIVADMTPDALLASDLLAQH
GIREPLYLSALKAAHCPLASTDKLSSLDNIGVEQYQSAFTQWQIDTPLAPSAEVAPALLQ
IRDLTYSYDGEKNAIENVSFDVKRGEFVSILGKNGSGKSTITKLIMGVVEPDAGNIDFDG
QDIANLNIFERSQKIGVVMQNPNHMISHHMIFDEVAFGLRNKGLEESVIEQKVEDVLALC
GLAKYRHWPIEALSYGQKKRVTIASILVMEPQLLILDEPTAGQDYRNYTSMLSFVQKLNR
EMGITVVIISHDMHLVLEYSTRSIVIADSLLIADQPMTQVFSQPDLLEQANLTTTSLYDL
AERLNIDDKIRFMQTFIEREKPAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgaattttctaacttctcttttagatatcagtcgctggataaaccgacacta
aaaaatatcaatctaaggatagagcaaggagagaaaatcgtcatcatcggtccaagcggt
agcggtaaatctacccttggtcagtgcttaaacggccttattcctcacgcgatttcaggt
gagatttccggtcacttaaccattaatggtcaagtgacttcggcgctggatctgcacgct
tttaccgaacaagttggtaccgttctacaagatactgatagccagtttgttggcctaagc
attggtgaagatattgcctttgccctggaaaaccaatgcatgtcgaatatcgagatgtac
ccactggtaaaagcaacggcaaaaatggtcgatcttgcagatatgctcgagcgttcaccg
cacgacttatccggtggtcaaaagcagcgagtatcactggctggcatccttgtagatgat
gtcgacattcttttgtttgatgagccgctggctgcactcgatccaaaaacaggtcgcaaa
accatcgaaatcatcgatgagctgcaccaaaaaaccaacaaaacgattgtgatgattgaa
caccgtcttgaggatgttctacatcgcaatgttgatcgtgttattttgatggagcaaggt
gaaatcgttgcagacatgacgccagatgcactgttggcttcagatttattggcgcaacac
ggtatccgtgagcctctctatctttctgctctcaaagccgctcattgccctcttgctagc
actgataagctctcttcactcgacaatatcggcgttgagcagtaccagtcagcttttacg
caatggcaaatcgatacccctctagcccctagcgctgaagttgcgcctgctctactgcaa
attcgcgacctgacttactcttatgatggtgagaagaacgccattgaaaacgtgtcattt
gacgtgaaacgtggtgagtttgtctcgatcttaggcaaaaacggttcaggcaaatcaacc
attactaagttgatcatgggcgttgttgaacccgatgctggcaatatcgactttgatggt
caagacattgctaacctcaatatttttgagcgcagtcagaagatcggtgtggtgatgcaa
aacccaaatcatatgatttctcatcatatgatcttcgatgaagttgccttcggcctacgt
aataaagggcttgaagaaagcgttatcgaacaaaaagtcgaagacgtactcgcattatgt
ggcttggcgaaatatcgccattggccaattgaagcgctgagttatggtcagaagaagcgc
gtgaccatcgcctcgattttggtgatggaaccacaactgttgattttggacgaaccaacg
gcagggcaagactaccgcaactacacgtcaatgctgagctttgtgcaaaaactcaaccgt
gagatgggcattactgtggtgatcatttctcatgatatgcacctggttttggagtactca
actcgttcgattgtgattgccgatagtctgttgatcgccgaccagcctatgacgcaagta
ttcagtcaaccagacttgcttgagcaagccaacctgacgaccaccagcttgtacgactta
gccgaacgattgaatatcgacgacaaaattcgctttatgcaaacctttattgaacgtgag
aaaccggcagcatga
DBGET
integrated database retrieval system
