Vibrio scophthalmi: VSVS12_04422
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Entry
VSVS12_04422 CDS
T04650
Name
(GenBank) SPBc2 prophage-derived DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsc03032
]
VSVS12_04422
03036 Chromosome and associated proteins [BR:
vsc03036
]
VSVS12_04422
03400 DNA repair and recombination proteins [BR:
vsc03400
]
VSVS12_04422
DNA replication proteins [BR:
vsc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VSVS12_04422
Chromosome and associated proteins [BR:
vsc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VSVS12_04422
DNA repair and recombination proteins [BR:
vsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VSVS12_04422
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
ANS88121
UniProt:
A0A1B1NWS4
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All DBs
Position
pVS127:40944..41219
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AA seq
91 aa
AA seq
DB search
MNKTELVAHVAEAAELSKADAGRAIDAIIDGITESLATGDDVALLGFGTFKISERAARDG
RNPRTGETIKIAASKVPSFKAGKALKDAVNQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactgaattagtggcccacgttgccgaagcggccgaactatcaaaagccgat
gccggacgtgcgatcgatgccattattgatgggatcactgagtcacttgcaactggtgat
gatgttgcactgcttggctttggtacatttaaaatttcagagcgtgcagcgcgtgatggt
cgcaaccctcgcactggcgagacgatcaagattgcagcaagcaaagtaccttcctttaaa
gcaggtaaggcattaaaagatgccgtaaatcagtaa
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