Vibrio scophthalmi: VSVS12_04507
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Entry
VSVS12_04507 CDS
T04650
Name
(GenBank) DNA topoisomerase
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
vsc
Vibrio scophthalmi
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsc03032
]
VSVS12_04507
Enzymes [BR:
vsc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VSVS12_04507
DNA replication proteins [BR:
vsc03032
]
Prokaryotic type
DNA Topoisomerases
VSVS12_04507
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
WHD_DUF6293
Motif
Other DBs
NCBI-ProteinID:
ANS88205
LinkDB
All DBs
Position
pVS127:105493..107652
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AA seq
719 aa
AA seq
DB search
MRVFLCEKPSQGRDVAAVLGCTKKIEGALTAANDAVTVTWGIGHILSQANPEDYDPALKA
WAYDTLPIVPSNWQMMVPADKKKQFKVIKELLLKATEVVIATDADREGEVIGRELLDFVG
YRGPVQRLWLSALDEASVRKALASLKPGHETEPLYWAGMARSRADWLLGMNLTRLCSLLA
RDAGYSTVFSIGRVQTPTLRLVVERDLAIARFVSKPFFDVVAGFNGLFDAKWQVPEMLGD
EAGRCLARASAESVVSQCQGQQAVVSVFETKRQKAKHPALFFLSALQKSMSSRYGYSAQQ
VLDTAQALYEKHKLTTYPRSDCGFLPMSQFDEVNDIVRGLAQVGEFSGWCQGVDTSLKSA
CWNDKKVAQSSHHAIIPTGKQPDLAALSEQERNVYIAIVQRYLAQFYPHAEDDATTVELT
CGAHRFKTRGVVERVKGWRIILASESDADESQEGKGEEQKQSLPVLTVGQSVSVSSARVV
EKKTTPPAHFTEGSLLDAMANIARSENIPAQFKAILKETAGLGTEATRAAIIETLKKRGF
IDAKGSGKSKKLISSDSGRALIGALPDEISNPVMTAIWEQSLDAIEKRAMTLDDFMQRQE
GFVRAIVSKVKSGELQLKLPKHVEVTHPCPLCGQPMHSRKGKTMFWACANKEVCGLILDN
ARGKPAAHQKCSCGKGVQVRKSGKEKGKFYWSCSAWKQGCTKRHFDEKGKIGPQIGDKP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgtttttatgtgaaaaaccgtctcaaggtcgtgatgttgccgcggttcttggt
tgtactaaaaagattgagggggctttgaccgcggcgaatgatgcagtgacagtgacctgg
gggattggtcatattttgtcgcaagcgaacccagaagattatgacccagcattaaaggca
tgggcctatgacacattaccgattgttccatccaattggcaaatgatggtgccggcggat
aagaagaagcaatttaaggtgatcaaagagttgctacttaaagccactgaagtggtgatc
gccacggatgcggaccgtgagggggaggtcattgggcgcgagttgctggattttgttggt
tatcgtgggccagtccaacggctctggctcagtgctttggatgaagcgagcgtgcgcaag
gcgctggcgagcttaaagcctgggcatgaaactgaacccctttattgggcagggatggct
cgtagtcgcgcggattggttgcttgggatgaatctcactcgcctctgctctttgcttgca
cgcgatgccggttacagcacggttttttccattggtcgtgtacaaacgccgacgcttcgt
cttgtcgttgagcgtgatttggccattgctcgttttgtctcgaaaccgttctttgatgtg
gtggctgggtttaatggtttgtttgatgcgaaatggcaagtgccggagatgctgggtgat
gaggcaggacgctgtttagctcgcgcttctgcagagagtgtggtgagccagtgccaagga
caacaagccgttgtttctgtttttgaaaccaaacgccaaaaagcgaagcatcccgcgctg
ttcttcttgagcgcgctgcaaaaaagtatgtcttcacgatatggctacagcgcccagcaa
gtactcgatacggcgcaagccttgtacgaaaagcataagctaacgacgtacccacgaagt
gattgtggttttttgccgatgagtcagtttgatgaagtaaacgatatcgttcgtggtttg
gcgcaggtcggtgaatttagtgggtggtgtcaaggtgttgatacctcgctaaagagtgcg
tgctggaacgataagaaagtggcgcaaagctctcaccacgccatcatcccaacagggaag
cagcctgatttagccgcattaagtgaacaagagcgaaatgtttacattgcgattgttcag
cgttatctcgctcagttttaccctcatgccgaagacgatgcgacgaccgtcgagctgacg
tgtggcgctcatcgttttaaaacgcgaggggtggtagagcgcgttaaaggttggcggatc
atcttggcatcggagagtgacgccgatgaatcgcaggaggggaaaggggaagagcaaaag
caatccttgcctgttttaacggtcggtcaatcggtttccgtttcaagcgcgcgtgttgtg
gaaaagaaaaccacgccaccggcgcattttaccgaaggctcgctcctcgatgcgatggcc
aacattgcgcgtagcgagaatatcccggctcagtttaaagcgattttgaaagagactgcg
gggcttggaaccgaagcgacacgtgcggccatcatcgagacactaaaaaaacgtggcttt
atcgatgccaaaggcagcggtaaaagcaaaaagttgatcagcagtgattctggtcgagcg
ttgattggggcgttgccggatgaaatcagcaatcccgttatgaccgcgatttgggagcaa
tcgctcgatgccattgaaaagcgagccatgacgttggacgactttatgcagcgtcaagaa
gggtttgtgcgagccattgtctcgaaagttaaaagtggtgaactccagttgaaactgcct
aagcatgttgaagtgacgcatccgtgtccactttgtggtcagccgatgcactcacgcaaa
ggaaaaacaatgttctgggcctgcgccaacaaagaggtgtgcggactgattttggataac
gctagaggtaagccggcggcgcatcaaaaatgcagttgtggtaaaggcgtgcaagttcgc
aagtctggcaaagagaaaggtaagttttactggagttgcagcgcgtggaagcaaggctgt
acgaagcgtcactttgatgaaaaaggcaagataggcccacagattggagataaaccatga
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