Vibrio mediterranei: BSZ05_01795
Help
Entry
BSZ05_01795 CDS
T04936
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vsh
Vibrio mediterranei
Pathway
vsh02020
Two-component system
vsh02040
Flagellar assembly
vsh05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BSZ05_01795
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
BSZ05_01795
09142 Cell motility
02040 Flagellar assembly
BSZ05_01795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vsh02022
]
BSZ05_01795
02035 Bacterial motility proteins [BR:
vsh02035
]
BSZ05_01795
Two-component system [BR:
vsh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
BSZ05_01795
Bacterial motility proteins [BR:
vsh02035
]
Flagellar system
Flagellar assembly proteins
Others
BSZ05_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
HTH_20
AAA_16
MerR
HTH_24
HTH_11
Mg_chelatase
HTH_28
AAA_19
FleQ
AAA_3
HTH_5
DUF2089
AAA_7
MCM
KorB_C
Sigma70_r4_2
HTH_Crp_2
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ASI88649
UniProt:
A0AAN1KLR0
LinkDB
All DBs
Position
1:complement(398194..399609)
Genome browser
AA seq
471 aa
AA seq
DB search
MAQSKVLIVEDDEGLREALVDTLALAGYEWVEADCAEDALVKLKTQPVDIVVSDVQMAGM
GGLALLRNIKQHWPNLPVLLMTAYANIEDAVAAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKSDDNGDAIVADAKSIQLLTLAEKVAKTDASVMVLGPSGSGKEVMSRYIHNKSLRADGP
FVAINCAAIPDNMLEATLFGYEKGAFTGAIQACPGKFEQAQGGTILLDEISEMDLNLQAK
LLRVLQEREVERLGSRKSIALDVRVLATSNRDLKQYVQEGNFREDLYYRLNVFPIAWPAL
CDRSGDIAPLARHLTERHCKKLGMPVPEFGQAALAKLMSYPWPGNVRELDNVVQRALILC
DESTICAEHILLEGVDWQDASSLQQVVSSPEQVTPEIAPVAQVSSDVMGRSVASSEGLGG
ELRDQEFSIILETLKECEGRRKEMAEKLGISPRTLRYKLAKMRDAGIEIPS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagcaaagtacttatcgtagaggatgatgaaggtcttcgcgaagctctcgtc
gatacattggcccttgcaggttacgagtgggtagaagccgattgcgctgaagatgcccta
gtgaaactcaaaactcagccggtagatattgttgtttctgatgtgcagatggcgggtatg
ggcggtttagcactcctgcgaaatattaagcagcattggcctaatttacctgtgttgtta
atgacagcttatgccaatattgaagatgcagtcgcggccatgaaggaaggtgcgattgat
tacatggcaaaaccctttgcgccggaagtgttgttgaatatggtcagtcgttatgcgcca
gtgaagtcagatgacaatggtgatgcgattgttgcggatgctaagagtattcaactgctt
actttggctgagaaagttgctaagactgacgccagtgtcatggtgctggggccgagtggc
tcaggtaaagaagtcatgtcacgctatatccacaacaaatcgctacgtgcggacggtcct
tttgtcgcaatcaactgtgcggcgattccagacaacatgttagaagcaacgctatttggc
tatgagaaaggggcgtttaccggcgctattcaagcttgtccggggaaatttgaacaagcc
caaggtggcaccattttgcttgatgagatcagtgaaatggacttaaacctccaagctaaa
ttacttcgcgtactacaagagcgtgaggtagagcggttaggcagtcgtaaaagcattgcg
ttggacgttcgagtattggcgaccagtaaccgtgatcttaaacaatatgttcaggaaggt
aacttccgtgaagacttatattatcgcttaaatgtgttcccaattgcgtggccagctctt
tgtgaccgttctggagatattgcgcctttagcccgtcatctaaccgagcgccactgtaag
aaattgggaatgccagtgccagaatttggtcaggcagcattagcaaaactcatgagctac
ccatggccgggtaacgttcgcgagctagataatgtggtgcaacgcgctttgatcttatgt
gacgagtcaaccatctgtgctgaacacattctattagaaggtgtggactggcaagacgca
tcgagcttacaacaagtggtgtcgagccctgagcaagttacaccggagattgctcctgtt
gctcaggtttcaagtgacgtgatgggtcgcagtgtagcatcaagcgaaggcttgggcggt
gaacttcgtgaccaagagttttcaattattctggagacgctcaaagagtgcgaaggtcgc
cgtaaagaaatggcggagaaacttggtattagcccacgaaccttacgctataagttagcg
aagatgcgcgatgctggtattgagatcccgagctaa
DBGET
integrated database retrieval system
