Vibrio mediterranei: BSZ05_02750
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Entry
BSZ05_02750 CDS
T04936
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vsh
Vibrio mediterranei
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsh01011
]
BSZ05_02750
Enzymes [BR:
vsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
BSZ05_02750
Peptidoglycan biosynthesis and degradation proteins [BR:
vsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
BSZ05_02750
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM2_CERK1_LYK3_4_5
Pilus_CpaD
ExoX-like_C
New_glue
Motif
Other DBs
NCBI-ProteinID:
ASI88830
UniProt:
A0AAN1KLX1
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Position
1:592995..594557
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AA seq
520 aa
AA seq
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MHKKYSWALALLLAGCQMTQPDSSNTTTEPTNSPAETATTNTTKPVSVDTPTPAKALTPQ
EQEDVWQRIAMQLKMEIPDNAKVDYYREWYIKHPSHLRTVSQRAQPFLYLITEEIEARNL
PLELALLPIVESSFDAFAYSHGSAAGLWQFVPATGKAFGLDQTYWYDGRRDVTASTQAAL
DYLTQLNKRFDGNWNHAIAAYNSGGGRVNSAIRKNRNLGKPTDFFSLDLPKETSSYVPKL
LALADVLANKEKYGVDIPPIANKPVLELVDPNEQLDLAIAAKYAGISIKELQSYNPAYNQ
WATAPDGPQTLLLPIETLDKFRFELEQNRGKGMRLVRYKVKSGDSLSVIARNHQTTTQVI
RSANGLKGNNIRAGQYLLVPTSTKDESTYSLSAANRLAKTQSTSRGNYKVTHKVASGDSL
WSIARANKVSHQSLAKWNGMGPRDTLRVGQELVIWKNASDGAIIRTVFYSVRSGDTISGI
AQKFKVRTNDVVKWNDLQKQKYLKPGQKLKLYVDVTKTSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgcataagaaatacagttgggccttagccctgttgctggccggttgtcagatgacacag
ccagattcaagcaacaccacaacagagcccaccaactctcctgcagaaacagcaaccact
aatacaacaaagcccgtttccgttgatactccaactccagcaaaagcactaacgccacaa
gagcaagaagatgtatggcagcgcatcgctatgcagctaaaaatggagattccagacaac
gctaaagtggactattaccgcgaatggtatattaaacaccctagccacttaagaacggtc
tcacagcgcgctcaacctttcctatatttgattactgaagaaattgaagcacgcaacctc
ccattagagcttgcgttactgcctattgtcgagagctcctttgatgccttcgcttattct
catggcagcgccgcaggattatggcagtttgtccccgcaacaggaaaagcgttcggtcta
gaccaaacctactggtatgacggtcgtcgtgacgttaccgcatcgactcaagccgcttta
gattacctgactcagttgaacaaacgttttgatggcaactggaatcacgcgatcgcggcc
tataacagtggcggtggtcgagtaaacagtgcgattcgaaaaaatcgtaacttaggcaag
ccaacggactttttctctcttgatttaccgaaagaaactagcagctatgtccctaagttg
ctggctctagctgatgttctggctaacaaagaaaagtatggtgtcgacattccaccaatt
gcaaataagcctgtgttggaattggtcgacccgaatgaacagctcgatctcgcaatcgca
gccaaatatgccggcatttcgattaaggaactgcagagttataaccctgcatacaaccaa
tgggcaactgcaccagatggccctcagacgttactgctgcccatcgagactttagataaa
ttccgcttcgaactggaacagaatcgtggtaaagggatgcgccttgtgcgttataaagta
aagtcaggtgactccttgagtgttatagcacgaaaccaccagacaacgacgcaagtaatt
cgcagtgctaatgggttaaaaggcaataatattcgcgcaggccagtatcttctggttccg
acatcaaccaaagatgaatcaacctattcactgagcgctgcaaaccgcctagcaaaaaca
caatcgacatctcgtggtaactataaagtgacccacaaagttgccagtggtgacagtttg
tggtcgattgccagagcaaataaagtttctcaccaatcgttggcaaaatggaacggtatg
ggtcctcgtgacacactaagagtaggacaagagcttgttatctggaaaaacgcgagcgat
ggcgcgattatccgcaccgttttctactctgtaagaagtggggataccatcagcggtatt
gcacagaaattcaaagtacgtaccaacgatgttgttaaatggaacgaccttcagaaacag
aaatatcttaagccgggccaaaaactgaaactctacgttgatgtcaccaaaaccagtgct
tag
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