Vibrio mediterranei: BSZ05_03665
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Entry
BSZ05_03665 CDS
T04936
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00470
D-Amino acid metabolism
vsh00550
Peptidoglycan biosynthesis
vsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BSZ05_03665 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BSZ05_03665 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vsh01011
]
BSZ05_03665 (murD)
Enzymes [BR:
vsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BSZ05_03665 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vsh01011
]
Precursor biosynthesis
Amino acid ligase
BSZ05_03665 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
NAD_binding_7
Thi4
DAO
HcgC
Motif
Other DBs
NCBI-ProteinID:
ASI88997
UniProt:
A0AAN1FEB5
LinkDB
All DBs
Position
1:complement(809061..810389)
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AA seq
442 aa
AA seq
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MDSWQDIKQVVVVGLGITGLSVVNHVSKNHPDVTVRVMDSRENPPGAEQLPEGVELHAGS
FNTEWLSQADLIVCNPGIALATPEIQQALDKGIRVVGDIELFAWANTKPVIAITGSNGKS
TVTDLTGAMAKAAGINVGVGGNIGVPALDLLELNADLYVLELSSFQLETTYSLKTKVSTF
LNLSEDHMDRYHGMEDYAQAKRRIFFNAEYALVNRDEPETSPEHAELPVATFGFNEQDFG
MREIDGQVWLVDNGEAIISTDQLRLVGKHNWSNALVACALLKLSGIDYRKGLACLAAYTG
LSHRCQVVADEKGIKWVNDSKATNVASTLAALSGLTLAGKLYLLVGGVGKGADFSELANP
LSELNVKLCCFGRDGEEFMTLHPSAVRYDTLNNVLADITPELQKGDMVMLSPACASFDQF
ANFMARGDDFTQLAQQFSKQVS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggattcttggcaagacataaagcaagtcgttgtagttgggctcggtattaccgggctc
tctgtcgttaatcatgttagtaaaaaccatcctgacgtaactgttcgtgtgatggacagt
cgggagaaccctcccggtgctgagcagttgccagaaggtgtagagctgcatgctggaagc
tttaatactgagtggttgagtcaagcagacctgattgtttgcaaccctggtattgctttg
gcaacaccagaaattcagcaagcactggacaaaggtattcgcgttgttggcgatatcgaa
ctgtttgcgtgggcaaataccaagcctgttattgctattacgggctctaacggtaaaagt
acagtgaccgatctaacaggggcaatggccaaagctgcgggtatcaacgtcggtgttggc
ggtaatattggtgttcctgctttagatttgctggaactgaatgccgacttgtatgtccta
gagttatctagcttccaactcgaaacaacctactcactaaaaaccaaagtatcgacattt
ttgaatctgtccgaagatcatatggatcgctaccatgggatggaagactatgcgcaagcg
aaacgacgtattttcttcaatgctgaatatgctttggtgaatcgtgatgagccagagact
tcccctgagcatgccgaacttcctgtagcaacgtttggttttaatgagcaagacttcggt
atgcgtgaaatcgacggacaagtctggctagtcgataacggtgaagccattatttctacc
gaccagcttcgtttggttggcaagcataattggtccaatgcgctggtggcctgtgcattg
ctcaaactgagcggtatcgactaccgaaaaggtttggcttgtttggctgcgtacactggt
ttgagtcatcgttgccaagtggttgcagatgaaaagggcatcaagtgggtgaatgattcc
aaggctactaacgtggcgagcacacttgcggcgttatctggcttaaccttagcgggtaaa
ctgtatcttttggtgggtggtgttggcaaaggcgctgatttttctgagttagccaacccc
ctgtctgagctgaatgtgaagttgtgctgttttgggagagatggtgaggagttcatgact
ttgcatccatcggcggttcgatatgacacgctcaataatgtcctagccgacattacaccc
gaactgcaaaagggtgatatggttatgttatctccagcttgtgcaagctttgatcagttt
gccaattttatggctcgtggagatgactttactcagctggctcagcaattttcaaaacaa
gttagttaa
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